Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 BRK1P2-201ENST00000442875 223 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.31□□□□□ -1.88
NR1H2P55055 RPL36AP51-201ENST00000487216 318 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 AC093663.1-201ENST00000497190 394 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.31□□□□□ -1.88
NR1H2P55055 SNORA74D-201ENST00000516404 141 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 RNU1-103P-201ENST00000516502 125 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 RNU6-579P-201ENST00000516879 102 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 RNU6-1315P-201ENST00000517187 99 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 AC022634.1-201ENST00000520765 532 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 AP003122.3-201ENST00000526316 255 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 AC084851.1-201ENST00000529105 249 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 AC104383.1-201ENST00000530297 370 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 AC103843.2-201ENST00000530523 682 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NR1H2P55055 OR5AL2P-201ENST00000532185 920 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.31□□□□□ -1.88
NR1H2P55055 AC026333.2-201ENST00000542164 106 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.31□□□□□ -1.88
NR1H2P55055 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.31□□□□□ -1.88
NR1H2P55055 AC025678.1-201ENST00000567861 338 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
NR1H2P55055 AL160281.1-201ENST00000605307 311 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NR1H2P55055 AC025034.2-201ENST00000623264 286 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
NR1H2P55055 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NR1H2P55055 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NR1H2P55055 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
NR1H2P55055 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NR1H2P55055 AC110491.1-201ENST00000562191 2010 ntBASIC3.31□□□□□ -1.88
NR1H2P55055 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.3□□□□□ -1.88
NR1H2P55055 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NR1H2P55055 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
NR1H2P55055 RNU6-778P-201ENST00000363269 103 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 RNU6-1090P-201ENST00000364065 94 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 RNU6-1322P-201ENST00000364309 107 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 RNU6-395P-201ENST00000365662 106 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 RNU6-483P-201ENST00000384088 108 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 Y_RNA.450-201ENST00000384198 113 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 RNU6-606P-201ENST00000384721 111 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 MIR34B-201ENST00000385076 84 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 RNU6-1158P-201ENST00000391167 107 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 U3.39-201ENST00000408569 239 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.3□□□□□ -1.88
NR1H2P55055 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.3□□□□□ -1.88
NR1H2P55055 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.3□□□□□ -1.88
NR1H2P55055 AL606489.2-201ENST00000433886 234 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 AC098831.1-201ENST00000440661 216 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.3□□□□□ -1.88
NR1H2P55055 AC008264.1-201ENST00000447612 367 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 FDX1P2-201ENST00000450769 375 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.3□□□□□ -1.88
NR1H2P55055 RPS29P15-201ENST00000458329 171 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 RNU7-182P-201ENST00000459009 62 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 RPS29P12-201ENST00000460178 152 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 CENPBD1P1-201ENST00000464061 469 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.3□□□□□ -1.88
NR1H2P55055 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.3□□□□□ -1.88
NR1H2P55055 AC074250.1-201ENST00000511117 192 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.3□□□□□ -1.88
NR1H2P55055 SNORA70.19-201ENST00000516717 90 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 RNU6-703P-201ENST00000516946 107 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.3□□□□□ -1.88
NR1H2P55055 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.3□□□□□ -1.88
NR1H2P55055 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.3□□□□□ -1.88
NR1H2P55055 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.3□□□□□ -1.88
NR1H2P55055 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.3□□□□□ -1.88
NR1H2P55055 AC025281.1-201ENST00000567026 265 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.3□□□□□ -1.88
NR1H2P55055 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.3□□□□□ -1.88
NR1H2P55055 AC010591.1-201ENST00000603941 649 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 AC007621.1-201ENST00000604544 437 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 AL158032.1-201ENST00000605401 106 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.3□□□□□ -1.88
NR1H2P55055 MIR15A-201ENST00000607334 83 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 U3.45-201ENST00000607547 219 ntBASIC3.3□□□□□ -1.88
NR1H2P55055 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.3□□□□□ -1.88
NR1H2P55055 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NR1H2P55055 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.3□□□□□ -1.88
NR1H2P55055 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
NR1H2P55055 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.3□□□□□ -1.88
NR1H2P55055 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NR1H2P55055 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NR1H2P55055 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
NR1H2P55055 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NR1H2P55055 NACAP2-201ENST00000318548 624 ntBASIC3.29□□□□□ -1.88
NR1H2P55055 RNU6-61P-201ENST00000365528 109 ntBASIC3.29□□□□□ -1.88
NR1H2P55055 CIR1P3-201ENST00000405137 479 ntBASIC3.29□□□□□ -1.88
NR1H2P55055 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.29□□□□□ -1.88
NR1H2P55055 SYF2P2-201ENST00000417620 583 ntBASIC3.29□□□□□ -1.88
NR1H2P55055 BPY2DP-201ENST00000422208 265 ntBASIC3.29□□□□□ -1.88
NR1H2P55055 AL158156.1-201ENST00000422509 473 ntBASIC3.29□□□□□ -1.88
NR1H2P55055 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.29□□□□□ -1.88
NR1H2P55055 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.29□□□□□ -1.88
NR1H2P55055 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.29□□□□□ -1.88
NR1H2P55055 SNORD105B-201ENST00000458770 79 ntBASIC3.29□□□□□ -1.88
NR1H2P55055 RNU7-63P-201ENST00000459054 62 ntBASIC3.29□□□□□ -1.88
NR1H2P55055 TRBV1-201ENST00000476502 284 ntBASIC3.29□□□□□ -1.88
NR1H2P55055 AC092989.1-201ENST00000481235 277 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms