Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 AC093663.1-201ENST00000497190 394 ntBASIC3.41□□□□□ -1.86
PMS2P54278 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.41□□□□□ -1.86
PMS2P54278 AC114781.4-201ENST00000513707 639 ntBASIC3.41□□□□□ -1.86
PMS2P54278 SNORD60.2-201ENST00000516883 86 ntBASIC3.41□□□□□ -1.86
PMS2P54278 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.41□□□□□ -1.86
PMS2P54278 ARL2BPP2-201ENST00000550907 489 ntBASIC3.41□□□□□ -1.86
PMS2P54278 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.41□□□□□ -1.86
PMS2P54278 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.41□□□□□ -1.86
PMS2P54278 AC006557.5-201ENST00000603126 811 ntBASIC3.41□□□□□ -1.86
PMS2P54278 AC005000.2-201ENST00000605468 310 ntBASIC3.41□□□□□ -1.86
PMS2P54278 AL121992.2-201ENST00000606262 256 ntBASIC3.41□□□□□ -1.86
PMS2P54278 RMST_3.1-201ENST00000611651 109 ntBASIC3.41□□□□□ -1.86
PMS2P54278 AL355365.1-201ENST00000616480 294 ntBASIC3.41□□□□□ -1.86
PMS2P54278 AC002076.2-201ENST00000617362 122 ntBASIC3.41□□□□□ -1.86
PMS2P54278 SNORD39.4-201ENST00000620099 78 ntBASIC3.41□□□□□ -1.86
PMS2P54278 AC006504.8-201ENST00000621046 635 ntBASIC3.41□□□□□ -1.86
PMS2P54278 AC024940.5-201ENST00000622889 474 ntBASIC3.41□□□□□ -1.86
PMS2P54278 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.41□□□□□ -1.86
PMS2P54278 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PMS2P54278 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.41□□□□□ -1.86
PMS2P54278 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PMS2P54278 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.41□□□□□ -1.86
PMS2P54278 OR4G2P-202ENST00000641004 1759 ntBASIC3.4□□□□□ -1.86
PMS2P54278 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.4□□□□□ -1.86
PMS2P54278 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.4□□□□□ -1.87
PMS2P54278 AL139276.1-201ENST00000311910 1001 ntBASIC3.4□□□□□ -1.87
PMS2P54278 AC073343.1-201ENST00000328239 651 ntBASIC3.4□□□□□ -1.87
PMS2P54278 RNU1-33P-201ENST00000364249 162 ntBASIC3.4□□□□□ -1.87
PMS2P54278 Y_RNA.279-201ENST00000364763 95 ntBASIC3.4□□□□□ -1.87
PMS2P54278 Y_RNA.381-201ENST00000365666 102 ntBASIC3.4□□□□□ -1.87
PMS2P54278 BX842559.1-201ENST00000419615 532 ntBASIC3.4□□□□□ -1.87
PMS2P54278 NDUFB4P6-201ENST00000436819 366 ntBASIC3.4□□□□□ -1.87
PMS2P54278 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.4□□□□□ -1.87
PMS2P54278 BNIP3P2-201ENST00000441221 577 ntBASIC3.4□□□□□ -1.87
PMS2P54278 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.4□□□□□ -1.87
PMS2P54278 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.4□□□□□ -1.87
PMS2P54278 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.4□□□□□ -1.87
PMS2P54278 RNU7-63P-201ENST00000459054 62 ntBASIC3.4□□□□□ -1.87
PMS2P54278 RNA5SP310-201ENST00000459084 116 ntBASIC3.4□□□□□ -1.87
PMS2P54278 AP000852.1-201ENST00000472460 573 ntBASIC3.4□□□□□ -1.87
PMS2P54278 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.4□□□□□ -1.87
PMS2P54278 AL163973.1-201ENST00000484753 577 ntBASIC3.4□□□□□ -1.87
PMS2P54278 RN7SL283P-201ENST00000489055 303 ntBASIC3.4□□□□□ -1.87
PMS2P54278 RPL39P36-201ENST00000490784 156 ntBASIC3.4□□□□□ -1.87
PMS2P54278 HMGB1P41-201ENST00000520234 440 ntBASIC3.4□□□□□ -1.87
PMS2P54278 AC123904.3-201ENST00000547218 814 ntBASIC3.4□□□□□ -1.87
PMS2P54278 AL138976.2-201ENST00000563989 694 ntBASIC3.4□□□□□ -1.87
PMS2P54278 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.4□□□□□ -1.87
PMS2P54278 AC015917.1-201ENST00000579654 510 ntBASIC3.4□□□□□ -1.87
PMS2P54278 MIR4775-201ENST00000581168 75 ntBASIC3.4□□□□□ -1.87
PMS2P54278 AC005730.3-201ENST00000583067 366 ntBASIC3.4□□□□□ -1.87
PMS2P54278 AC011471.1-201ENST00000585766 187 ntBASIC3.4□□□□□ -1.87
PMS2P54278 uc_338.1-201ENST00000612113 180 ntBASIC3.4□□□□□ -1.87
PMS2P54278 AC104260.1-201ENST00000616660 539 ntBASIC3.4□□□□□ -1.87
PMS2P54278 SNHG22-203ENST00000617833 660 ntBASIC3.4□□□□□ -1.87
PMS2P54278 FRG1KP-201ENST00000623592 341 ntBASIC3.4□□□□□ -1.87
PMS2P54278 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.4□□□□□ -1.87
PMS2P54278 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PMS2P54278 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
PMS2P54278 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PMS2P54278 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PMS2P54278 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.39□□□□□ -1.87
PMS2P54278 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.39□□□□□ -1.87
PMS2P54278 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PMS2P54278 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.39□□□□□ -1.87
PMS2P54278 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PMS2P54278 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
PMS2P54278 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PMS2P54278 CBX3P1-201ENST00000325243 554 ntBASIC3.39□□□□□ -1.87
PMS2P54278 Y_RNA.70-201ENST00000362886 110 ntBASIC3.39□□□□□ -1.87
PMS2P54278 RNU6-996P-201ENST00000365438 107 ntBASIC3.39□□□□□ -1.87
PMS2P54278 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.39□□□□□ -1.87
PMS2P54278 RNU6-1197P-201ENST00000391183 107 ntBASIC3.39□□□□□ -1.87
PMS2P54278 AL356776.1-201ENST00000406574 447 ntBASIC3.39□□□□□ -1.87
PMS2P54278 SNORA11.2-201ENST00000408318 127 ntBASIC3.39□□□□□ -1.87
PMS2P54278 RNU2-36P-201ENST00000410361 191 ntBASIC3.39□□□□□ -1.87
PMS2P54278 RNU2-39P-201ENST00000410604 198 ntBASIC3.39□□□□□ -1.87
PMS2P54278 RNU6-373P-201ENST00000411247 98 ntBASIC3.39□□□□□ -1.87
PMS2P54278 OR9R1P-201ENST00000412200 877 ntBASIC3.39□□□□□ -1.87
PMS2P54278 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.39□□□□□ -1.87
PMS2P54278 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.39□□□□□ -1.87
PMS2P54278 SDCBPP3-201ENST00000419629 891 ntBASIC3.39□□□□□ -1.87
PMS2P54278 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.39□□□□□ -1.87
PMS2P54278 HIGD1AP11-201ENST00000438361 280 ntBASIC3.39□□□□□ -1.87
PMS2P54278 MTND4LP16-201ENST00000440828 295 ntBASIC3.39□□□□□ -1.87
PMS2P54278 SNRPEP8-201ENST00000442866 260 ntBASIC3.39□□□□□ -1.87
PMS2P54278 RBMY2UP-201ENST00000453474 324 ntBASIC3.39□□□□□ -1.87
PMS2P54278 RN7SL807P-201ENST00000470923 297 ntBASIC3.39□□□□□ -1.87
PMS2P54278 MTCO2P30-201ENST00000503662 364 ntBASIC3.39□□□□□ -1.87
PMS2P54278 AC116562.3-201ENST00000506136 177 ntBASIC3.39□□□□□ -1.87
PMS2P54278 AC018710.1-201ENST00000506509 158 ntBASIC3.39□□□□□ -1.87
PMS2P54278 AC098799.2-201ENST00000509466 868 ntBASIC3.39□□□□□ -1.87
PMS2P54278 AC046134.1-201ENST00000514454 666 ntBASIC3.39□□□□□ -1.87
PMS2P54278 RNA5SP401-201ENST00000515920 127 ntBASIC3.39□□□□□ -1.87
PMS2P54278 RNU6-390P-201ENST00000516259 103 ntBASIC3.39□□□□□ -1.87
PMS2P54278 RN7SKP57-201ENST00000517248 293 ntBASIC3.39□□□□□ -1.87
PMS2P54278 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.39□□□□□ -1.87
PMS2P54278 AC068587.5-201ENST00000528506 175 ntBASIC3.39□□□□□ -1.87
PMS2P54278 AC093012.1-202ENST00000549403 582 ntBASIC3.39□□□□□ -1.87
PMS2P54278 HIF1AP1-201ENST00000553642 175 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 293.4 ms