Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
PDX1P52945 RNU6-1097P-201ENST00000363586 107 ntBASIC2.9□□□□□ -1.95
PDX1P52945 SNORA62.1-201ENST00000364287 154 ntBASIC2.9□□□□□ -1.95
PDX1P52945 RNU6-61P-201ENST00000365528 109 ntBASIC2.9□□□□□ -1.95
PDX1P52945 RNU6-780P-201ENST00000391030 104 ntBASIC2.9□□□□□ -1.95
PDX1P52945 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PDX1P52945 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.9□□□□□ -1.95
PDX1P52945 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PDX1P52945 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.9□□□□□ -1.95
PDX1P52945 MTATP6P18-201ENST00000417994 673 ntBASIC2.9□□□□□ -1.95
PDX1P52945 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.9□□□□□ -1.95
PDX1P52945 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.9□□□□□ -1.95
PDX1P52945 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.9□□□□□ -1.95
PDX1P52945 AC105272.1-201ENST00000438604 198 ntBASIC2.9□□□□□ -1.95
PDX1P52945 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.9□□□□□ -1.95
PDX1P52945 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.9□□□□□ -1.95
PDX1P52945 AC023194.1-201ENST00000493084 308 ntBASIC2.9□□□□□ -1.95
PDX1P52945 HIGD1AP13-201ENST00000509878 289 ntBASIC2.9□□□□□ -1.95
PDX1P52945 RNA5SP290-201ENST00000517133 127 ntBASIC2.9□□□□□ -1.95
PDX1P52945 AC245166.1-201ENST00000521012 253 ntBASIC2.9□□□□□ -1.95
PDX1P52945 IGHV3-76-201ENST00000522465 295 ntBASIC2.9□□□□□ -1.95
PDX1P52945 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.9□□□□□ -1.95
PDX1P52945 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.9□□□□□ -1.95
PDX1P52945 AMZ2P1-203ENST00000565833 850 ntBASIC2.9□□□□□ -1.95
PDX1P52945 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.9□□□□□ -1.95
PDX1P52945 AC010653.1-201ENST00000571108 881 ntBASIC2.9□□□□□ -1.95
PDX1P52945 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.9□□□□□ -1.95
PDX1P52945 AC005951.1-201ENST00000576706 485 ntBASIC2.9□□□□□ -1.95
PDX1P52945 AL021997.1-201ENST00000605757 193 ntBASIC2.9□□□□□ -1.95
PDX1P52945 AC107294.1-201ENST00000609524 467 ntBASIC2.9□□□□□ -1.95
PDX1P52945 AC007684.1-201ENST00000609671 477 ntBASIC2.9□□□□□ -1.95
PDX1P52945 MIR6076-201ENST00000617521 113 ntBASIC2.9□□□□□ -1.95
PDX1P52945 AC068792.1-201ENST00000621354 417 ntBASIC2.9□□□□□ -1.95
PDX1P52945 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.9□□□□□ -1.95
PDX1P52945 AL157786.1-207ENST00000627771 695 ntBASIC2.9□□□□□ -1.95
PDX1P52945 SNORA50A-202ENST00000629536 136 ntBASIC2.9□□□□□ -1.95
PDX1P52945 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.9□□□□□ -1.95
PDX1P52945 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
PDX1P52945 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.9□□□□□ -1.95
PDX1P52945 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PDX1P52945 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PDX1P52945 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
PDX1P52945 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PDX1P52945 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PDX1P52945 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.9□□□□□ -1.95
PDX1P52945 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.9□□□□□ -1.95
PDX1P52945 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
PDX1P52945 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
PDX1P52945 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PDX1P52945 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PDX1P52945 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PDX1P52945 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.89□□□□□ -1.95
PDX1P52945 Y_RNA.409-201ENST00000383990 98 ntBASIC2.89□□□□□ -1.95
PDX1P52945 RNU6-301P-201ENST00000384277 107 ntBASIC2.89□□□□□ -1.95
PDX1P52945 RNU6-1215P-201ENST00000384441 102 ntBASIC2.89□□□□□ -1.95
PDX1P52945 Y_RNA.505-201ENST00000384489 102 ntBASIC2.89□□□□□ -1.95
PDX1P52945 SNORA1.3-201ENST00000384676 136 ntBASIC2.89□□□□□ -1.95
PDX1P52945 RNA5SP252-201ENST00000391131 119 ntBASIC2.89□□□□□ -1.95
PDX1P52945 CALM2P3-201ENST00000400429 449 ntBASIC2.89□□□□□ -1.95
PDX1P52945 UBE2V1P10-201ENST00000414685 269 ntBASIC2.89□□□□□ -1.95
PDX1P52945 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.89□□□□□ -1.95
PDX1P52945 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PDX1P52945 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.89□□□□□ -1.95
PDX1P52945 AC092047.1-201ENST00000424997 240 ntBASIC2.89□□□□□ -1.95
PDX1P52945 AL592045.1-201ENST00000429867 352 ntBASIC2.89□□□□□ -1.95
PDX1P52945 HMGB1P27-201ENST00000431429 603 ntBASIC2.89□□□□□ -1.95
PDX1P52945 AL591212.2-201ENST00000433923 257 ntBASIC2.89□□□□□ -1.95
PDX1P52945 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.89□□□□□ -1.95
PDX1P52945 MTND1P1-201ENST00000445453 368 ntBASIC2.89□□□□□ -1.95
PDX1P52945 AC108938.1-201ENST00000451204 136 ntBASIC2.89□□□□□ -1.95
PDX1P52945 FABP5P13-201ENST00000452144 328 ntBASIC2.89□□□□□ -1.95
PDX1P52945 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.89□□□□□ -1.95
PDX1P52945 AC126389.1-201ENST00000477436 290 ntBASIC2.89□□□□□ -1.95
PDX1P52945 AL160314.1-201ENST00000490836 438 ntBASIC2.89□□□□□ -1.95
PDX1P52945 SUMO2P6-201ENST00000505273 288 ntBASIC2.89□□□□□ -1.95
PDX1P52945 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.89□□□□□ -1.95
PDX1P52945 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.89□□□□□ -1.95
PDX1P52945 RNA5SP367-201ENST00000516557 118 ntBASIC2.89□□□□□ -1.95
PDX1P52945 RNU6-677P-201ENST00000516914 101 ntBASIC2.89□□□□□ -1.95
PDX1P52945 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.89□□□□□ -1.95
PDX1P52945 ATP5F1P5-201ENST00000526403 760 ntBASIC2.89□□□□□ -1.95
PDX1P52945 AP000867.2-201ENST00000532468 320 ntBASIC2.89□□□□□ -1.95
PDX1P52945 MIR4319-201ENST00000577285 85 ntBASIC2.89□□□□□ -1.95
PDX1P52945 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.89□□□□□ -1.95
PDX1P52945 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.89□□□□□ -1.95
PDX1P52945 AC068790.6-201ENST00000602558 258 ntBASIC2.89□□□□□ -1.95
PDX1P52945 AC104763.2-201ENST00000604179 382 ntBASIC2.89□□□□□ -1.95
PDX1P52945 AC004492.1-201ENST00000607036 742 ntBASIC2.89□□□□□ -1.95
PDX1P52945 AC022893.3-201ENST00000607665 437 ntBASIC2.89□□□□□ -1.95
PDX1P52945 AF250324.2-201ENST00000608299 610 ntBASIC2.89□□□□□ -1.95
PDX1P52945 AC092954.2-201ENST00000609103 430 ntBASIC2.89□□□□□ -1.95
PDX1P52945 AC013562.2-201ENST00000611632 603 ntBASIC2.89□□□□□ -1.95
PDX1P52945 AC012409.4-201ENST00000612923 249 ntBASIC2.89□□□□□ -1.95
PDX1P52945 AC025034.2-201ENST00000623264 286 ntBASIC2.89□□□□□ -1.95
PDX1P52945 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PDX1P52945 AC009487.2-201ENST00000420969 6821 ntBASIC2.89□□□□□ -1.95
PDX1P52945 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.89□□□□□ -1.95
PDX1P52945 TPTE2P4-201ENST00000258589 1605 ntBASIC2.89□□□□□ -1.95
PDX1P52945 ZNF680P1-201ENST00000436625 1469 ntBASIC2.89□□□□□ -1.95
PDX1P52945 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms