Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLK2P49760 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CLK2P49760 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLK2P49760 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.41□□□□□ -1.54
CLK2P49760 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.41□□□□□ -1.54
CLK2P49760 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.41□□□□□ -1.54
CLK2P49760 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLK2P49760 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLK2P49760 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLK2P49760 AC079741.1-201ENST00000321498 212 ntBASIC5.41□□□□□ -1.54
CLK2P49760 SNORA25.1-201ENST00000362326 128 ntBASIC5.41□□□□□ -1.54
CLK2P49760 RNU6-1020P-201ENST00000363684 107 ntBASIC5.41□□□□□ -1.54
CLK2P49760 RNU6-514P-201ENST00000384208 107 ntBASIC5.41□□□□□ -1.54
CLK2P49760 Y_RNA.506-201ENST00000384494 102 ntBASIC5.41□□□□□ -1.54
CLK2P49760 RNU6-125P-201ENST00000384505 107 ntBASIC5.41□□□□□ -1.54
CLK2P49760 RNU4-30P-201ENST00000410245 143 ntBASIC5.41□□□□□ -1.54
CLK2P49760 AL590139.1-201ENST00000416267 400 ntBASIC5.41□□□□□ -1.54
CLK2P49760 AC092047.1-201ENST00000424997 240 ntBASIC5.41□□□□□ -1.54
CLK2P49760 AC016831.4-201ENST00000438302 307 ntBASIC5.41□□□□□ -1.54
CLK2P49760 AC243964.1-201ENST00000441814 261 ntBASIC5.41□□□□□ -1.54
CLK2P49760 MTATP6P7-201ENST00000453315 681 ntBASIC5.41□□□□□ -1.54
CLK2P49760 MRPL42P6-201ENST00000486397 371 ntBASIC5.41□□□□□ -1.54
CLK2P49760 RNU7-110P-201ENST00000516891 62 ntBASIC5.41□□□□□ -1.54
CLK2P49760 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.41□□□□□ -1.54
CLK2P49760 AK6P2-201ENST00000549020 471 ntBASIC5.41□□□□□ -1.54
CLK2P49760 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.41□□□□□ -1.54
CLK2P49760 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CLK2P49760 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.41□□□□□ -1.54
CLK2P49760 AC024581.2-201ENST00000619986 252 ntBASIC5.41□□□□□ -1.54
CLK2P49760 AC132825.6-201ENST00000638861 357 ntBASIC5.41□□□□□ -1.54
CLK2P49760 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLK2P49760 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.41□□□□□ -1.54
CLK2P49760 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.41□□□□□ -1.54
CLK2P49760 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLK2P49760 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLK2P49760 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLK2P49760 AL590240.1-201ENST00000334118 313 ntBASIC5.4□□□□□ -1.54
CLK2P49760 Y_RNA.286-201ENST00000364813 102 ntBASIC5.4□□□□□ -1.54
CLK2P49760 RNU6-898P-201ENST00000365627 104 ntBASIC5.4□□□□□ -1.54
CLK2P49760 Z98749.2-208ENST00000381646 500 ntBASIC5.4□□□□□ -1.54
CLK2P49760 RNU6-142P-201ENST00000384019 107 ntBASIC5.4□□□□□ -1.54
CLK2P49760 Y_RNA.569-201ENST00000384749 103 ntBASIC5.4□□□□□ -1.54
CLK2P49760 RNU6-493P-201ENST00000391321 108 ntBASIC5.4□□□□□ -1.54
CLK2P49760 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.4□□□□□ -1.54
CLK2P49760 AC096638.1-201ENST00000444678 216 ntBASIC5.4□□□□□ -1.54
CLK2P49760 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.4□□□□□ -1.54
CLK2P49760 AC073901.1-201ENST00000462471 408 ntBASIC5.4□□□□□ -1.54
CLK2P49760 AC010326.1-201ENST00000462726 602 ntBASIC5.4□□□□□ -1.54
CLK2P49760 RPL23AP65-201ENST00000475608 468 ntBASIC5.4□□□□□ -1.54
CLK2P49760 RNA5SP249-201ENST00000516127 99 ntBASIC5.4□□□□□ -1.54
CLK2P49760 Y_RNA.683-201ENST00000516508 93 ntBASIC5.4□□□□□ -1.54
CLK2P49760 RNU6-861P-201ENST00000516745 106 ntBASIC5.4□□□□□ -1.54
CLK2P49760 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.4□□□□□ -1.54
CLK2P49760 AC083837.1-201ENST00000565297 2994 ntBASIC5.4□□□□□ -1.54
CLK2P49760 AC072026.1-201ENST00000605023 201 ntBASIC5.4□□□□□ -1.54
CLK2P49760 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
CLK2P49760 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.4□□□□□ -1.55
CLK2P49760 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
CLK2P49760 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLK2P49760 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLK2P49760 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLK2P49760 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLK2P49760 AL136964.1-201ENST00000622038 2990 ntBASIC5.39□□□□□ -1.55
CLK2P49760 AL672167.1-204ENST00000641875 3017 ntBASIC5.39□□□□□ -1.55
CLK2P49760 RNA5SP361-201ENST00000362686 118 ntBASIC5.39□□□□□ -1.55
CLK2P49760 RNU6-740P-201ENST00000364734 105 ntBASIC5.39□□□□□ -1.55
CLK2P49760 Y_RNA.292-201ENST00000364904 97 ntBASIC5.39□□□□□ -1.55
CLK2P49760 RNY4P28-201ENST00000365281 93 ntBASIC5.39□□□□□ -1.55
CLK2P49760 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLK2P49760 MIR518D-201ENST00000385014 87 ntBASIC5.39□□□□□ -1.55
CLK2P49760 AC140479.3-201ENST00000418944 1126 ntBASIC5.39□□□□□ -1.55
CLK2P49760 AL031659.1-201ENST00000447075 539 ntBASIC5.39□□□□□ -1.55
CLK2P49760 HMGN2P21-201ENST00000447764 270 ntBASIC5.39□□□□□ -1.55
CLK2P49760 COX6B1P2-201ENST00000489624 230 ntBASIC5.39□□□□□ -1.55
CLK2P49760 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC5.39□□□□□ -1.55
CLK2P49760 BTF3L4P4-201ENST00000506381 449 ntBASIC5.39□□□□□ -1.55
CLK2P49760 AC093840.1-201ENST00000511599 336 ntBASIC5.39□□□□□ -1.55
CLK2P49760 RNU1-103P-201ENST00000516502 125 ntBASIC5.39□□□□□ -1.55
CLK2P49760 RN7SKP49-201ENST00000516675 260 ntBASIC5.39□□□□□ -1.55
CLK2P49760 AC016256.1-201ENST00000547971 354 ntBASIC5.39□□□□□ -1.55
CLK2P49760 H3F3AP1-201ENST00000559984 334 ntBASIC5.39□□□□□ -1.55
CLK2P49760 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
CLK2P49760 MIR4700-201ENST00000578311 74 ntBASIC5.39□□□□□ -1.55
CLK2P49760 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.39□□□□□ -1.55
CLK2P49760 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.39□□□□□ -1.55
CLK2P49760 AC083843.2-201ENST00000568248 6253 ntBASIC5.39□□□□□ -1.55
CLK2P49760 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CLK2P49760 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
CLK2P49760 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLK2P49760 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLK2P49760 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CLK2P49760 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.38□□□□□ -1.55
CLK2P49760 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.38□□□□□ -1.55
CLK2P49760 FTLP6-201ENST00000355274 422 ntBASIC5.38□□□□□ -1.55
CLK2P49760 SNORA70F-201ENST00000384142 135 ntBASIC5.38□□□□□ -1.55
CLK2P49760 SNORA29-201ENST00000384183 140 ntBASIC5.38□□□□□ -1.55
CLK2P49760 RNA5SP213-201ENST00000391031 106 ntBASIC5.38□□□□□ -1.55
CLK2P49760 RNU6-1197P-201ENST00000391183 107 ntBASIC5.38□□□□□ -1.55
CLK2P49760 MIR548I2-201ENST00000408348 149 ntBASIC5.38□□□□□ -1.55
CLK2P49760 Y_RNA.590-201ENST00000410140 107 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms