Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 RNU2-62P-201ENST00000410868 191 ntBASIC3.55□□□□□ -1.84
MMP13P45452 RPS29P4-201ENST00000414733 161 ntBASIC3.55□□□□□ -1.84
MMP13P45452 VN1R36P-201ENST00000414936 291 ntBASIC3.55□□□□□ -1.84
MMP13P45452 CRYBB2P1-203ENST00000415709 538 ntBASIC3.55□□□□□ -1.84
MMP13P45452 TOMM22P1-201ENST00000418578 312 ntBASIC3.55□□□□□ -1.84
MMP13P45452 RPL23AP82-202ENST00000427528 469 ntBASIC3.55□□□□□ -1.84
MMP13P45452 AC236972.2-201ENST00000434979 310 ntBASIC3.55□□□□□ -1.84
MMP13P45452 AC005094.1-201ENST00000440420 368 ntBASIC3.55□□□□□ -1.84
MMP13P45452 RPL21P23-201ENST00000446654 460 ntBASIC3.55□□□□□ -1.84
MMP13P45452 AC016696.1-201ENST00000446949 318 ntBASIC3.55□□□□□ -1.84
MMP13P45452 AC108059.3-201ENST00000456388 214 ntBASIC3.55□□□□□ -1.84
MMP13P45452 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.55□□□□□ -1.84
MMP13P45452 U3.44-201ENST00000458938 192 ntBASIC3.55□□□□□ -1.84
MMP13P45452 CENPBD1P1-201ENST00000464061 469 ntBASIC3.55□□□□□ -1.84
MMP13P45452 RPL21P104-201ENST00000464143 478 ntBASIC3.55□□□□□ -1.84
MMP13P45452 RPL21P93-201ENST00000480465 489 ntBASIC3.55□□□□□ -1.84
MMP13P45452 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.55□□□□□ -1.84
MMP13P45452 AC135721.1-201ENST00000497954 479 ntBASIC3.55□□□□□ -1.84
MMP13P45452 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.55□□□□□ -1.84
MMP13P45452 HMGB3P15-201ENST00000507326 574 ntBASIC3.55□□□□□ -1.84
MMP13P45452 KLHL2P1-201ENST00000508691 521 ntBASIC3.55□□□□□ -1.84
MMP13P45452 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.55□□□□□ -1.84
MMP13P45452 SNORA67.7-201ENST00000516664 135 ntBASIC3.55□□□□□ -1.84
MMP13P45452 FAM60DP-201ENST00000524174 632 ntBASIC3.55□□□□□ -1.84
MMP13P45452 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.55□□□□□ -1.84
MMP13P45452 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.55□□□□□ -1.84
MMP13P45452 APOOP3-201ENST00000536787 586 ntBASIC3.55□□□□□ -1.84
MMP13P45452 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.55□□□□□ -1.84
MMP13P45452 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.55□□□□□ -1.84
MMP13P45452 MIR3690-201ENST00000580266 75 ntBASIC3.55□□□□□ -1.84
MMP13P45452 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.55□□□□□ -1.84
MMP13P45452 AL133215.3-201ENST00000609801 448 ntBASIC3.55□□□□□ -1.84
MMP13P45452 AC243312.2-201ENST00000623340 601 ntBASIC3.55□□□□□ -1.84
MMP13P45452 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.55□□□□□ -1.84
MMP13P45452 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.55□□□□□ -1.84
MMP13P45452 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
MMP13P45452 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.55□□□□□ -1.84
MMP13P45452 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.55□□□□□ -1.84
MMP13P45452 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
MMP13P45452 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.55□□□□□ -1.84
MMP13P45452 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.55□□□□□ -1.84
MMP13P45452 ZNF826P-207ENST00000622273 1910 ntBASIC3.54□□□□□ -1.84
MMP13P45452 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
MMP13P45452 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
MMP13P45452 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
MMP13P45452 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.54□□□□□ -1.84
MMP13P45452 Y_RNA.100-201ENST00000363141 102 ntBASIC3.54□□□□□ -1.84
MMP13P45452 SNORD56.3-201ENST00000363507 71 ntBASIC3.54□□□□□ -1.84
MMP13P45452 SNORD115-7-201ENST00000365306 82 ntBASIC3.54□□□□□ -1.84
MMP13P45452 SNORA33.2-201ENST00000365413 134 ntBASIC3.54□□□□□ -1.84
MMP13P45452 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
MMP13P45452 Y_RNA.576-201ENST00000384781 102 ntBASIC3.54□□□□□ -1.84
MMP13P45452 RNU6-308P-201ENST00000390957 107 ntBASIC3.54□□□□□ -1.84
MMP13P45452 RNU6-821P-201ENST00000390995 107 ntBASIC3.54□□□□□ -1.84
MMP13P45452 RNY4P36-201ENST00000391116 96 ntBASIC3.54□□□□□ -1.84
MMP13P45452 AL136372.1-201ENST00000403060 228 ntBASIC3.54□□□□□ -1.84
MMP13P45452 MIR548K-201ENST00000408406 116 ntBASIC3.54□□□□□ -1.84
MMP13P45452 MIR548F5-201ENST00000408421 86 ntBASIC3.54□□□□□ -1.84
MMP13P45452 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.54□□□□□ -1.84
MMP13P45452 AC017079.2-201ENST00000416102 485 ntBASIC3.54□□□□□ -1.84
MMP13P45452 NCOR1P3-201ENST00000420479 303 ntBASIC3.54□□□□□ -1.84
MMP13P45452 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.54□□□□□ -1.84
MMP13P45452 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.54□□□□□ -1.84
MMP13P45452 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.54□□□□□ -1.84
MMP13P45452 RPL32P28-201ENST00000443577 397 ntBASIC3.54□□□□□ -1.84
MMP13P45452 GAPDHP27-201ENST00000447427 1020 ntBASIC3.54□□□□□ -1.84
MMP13P45452 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.54□□□□□ -1.84
MMP13P45452 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.54□□□□□ -1.84
MMP13P45452 RNU7-152P-201ENST00000458982 64 ntBASIC3.54□□□□□ -1.84
MMP13P45452 RNU7-59P-201ENST00000459101 61 ntBASIC3.54□□□□□ -1.84
MMP13P45452 RNU6-1208P-201ENST00000459588 107 ntBASIC3.54□□□□□ -1.84
MMP13P45452 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.54□□□□□ -1.84
MMP13P45452 HMGB1P25-201ENST00000468402 607 ntBASIC3.54□□□□□ -1.84
MMP13P45452 SNRPGP3-201ENST00000469405 227 ntBASIC3.54□□□□□ -1.84
MMP13P45452 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.54□□□□□ -1.84
MMP13P45452 RNA5SP503-201ENST00000517047 117 ntBASIC3.54□□□□□ -1.84
MMP13P45452 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.54□□□□□ -1.84
MMP13P45452 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.54□□□□□ -1.84
MMP13P45452 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.54□□□□□ -1.84
MMP13P45452 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.54□□□□□ -1.84
MMP13P45452 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.54□□□□□ -1.84
MMP13P45452 SNORA51-201ENST00000606420 132 ntBASIC3.54□□□□□ -1.84
MMP13P45452 AC006023.2-201ENST00000609916 167 ntBASIC3.54□□□□□ -1.84
MMP13P45452 AP001486.3-201ENST00000615334 372 ntBASIC3.54□□□□□ -1.84
MMP13P45452 MTND5P42-201ENST00000637720 498 ntBASIC3.54□□□□□ -1.84
MMP13P45452 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.54□□□□□ -1.84
MMP13P45452 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.54□□□□□ -1.84
MMP13P45452 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MMP13P45452 AC066616.2-201ENST00000559334 1481 ntBASIC3.54□□□□□ -1.84
MMP13P45452 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.53□□□□□ -1.84
MMP13P45452 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
MMP13P45452 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
MMP13P45452 MIR148B-201ENST00000362252 99 ntBASIC3.53□□□□□ -1.84
MMP13P45452 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
MMP13P45452 SNORD51-201ENST00000384320 80 ntBASIC3.53□□□□□ -1.84
MMP13P45452 EI24P2-201ENST00000397776 1076 ntBASIC3.53□□□□□ -1.84
MMP13P45452 RNU2-29P-201ENST00000410423 189 ntBASIC3.53□□□□□ -1.84
MMP13P45452 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.53□□□□□ -1.84
MMP13P45452 AC092447.6-201ENST00000414578 210 ntBASIC3.53□□□□□ -1.84
MMP13P45452 PMCHL1-202ENST00000423102 261 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms