Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 MIR3682-201ENST00000581338 84 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 AC090616.3-201ENST00000582184 217 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.95□□□□□ -1.94
HNF4AP41235 AL022154.1-201ENST00000604698 785 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 AC004805.2-201ENST00000605382 482 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.95□□□□□ -1.94
HNF4AP41235 AC034102.8-201ENST00000615146 484 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 AC072046.2-201ENST00000618366 268 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 AC136475.10-201ENST00000620253 385 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 MIR3651-201ENST00000630427 90 ntBASIC2.95□□□□□ -1.94
HNF4AP41235 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.95□□□□□ -1.94
HNF4AP41235 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.95□□□□□ -1.94
HNF4AP41235 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HNF4AP41235 AL359693.1-201ENST00000614959 2407 ntBASIC2.94□□□□□ -1.94
HNF4AP41235 AC009487.2-201ENST00000420969 6821 ntBASIC2.94□□□□□ -1.94
HNF4AP41235 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
HNF4AP41235 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.94□□□□□ -1.94
HNF4AP41235 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.94□□□□□ -1.94
HNF4AP41235 AC108206.1-201ENST00000570186 4159 ntBASIC2.94□□□□□ -1.94
HNF4AP41235 RNU5E-1-201ENST00000362477 120 ntBASIC2.94□□□□□ -1.94
HNF4AP41235 RNU6-1167P-201ENST00000363227 94 ntBASIC2.94□□□□□ -1.94
HNF4AP41235 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.94□□□□□ -1.94
HNF4AP41235 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.94□□□□□ -1.94
HNF4AP41235 AC019097.1-201ENST00000424783 735 ntBASIC2.94□□□□□ -1.94
HNF4AP41235 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.94□□□□□ -1.94
HNF4AP41235 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.94□□□□□ -1.94
HNF4AP41235 DPPA3P1-201ENST00000448050 469 ntBASIC2.94□□□□□ -1.94
HNF4AP41235 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.94□□□□□ -1.94
HNF4AP41235 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.94□□□□□ -1.94
HNF4AP41235 AC108059.3-201ENST00000456388 214 ntBASIC2.94□□□□□ -1.94
HNF4AP41235 RPS3AP17-201ENST00000472594 777 ntBASIC2.94□□□□□ -1.94
HNF4AP41235 RN7SL633P-201ENST00000488974 297 ntBASIC2.94□□□□□ -1.94
HNF4AP41235 RNU6-506P-201ENST00000516553 94 ntBASIC2.94□□□□□ -1.94
HNF4AP41235 RN7SKP272-201ENST00000516988 232 ntBASIC2.94□□□□□ -1.94
HNF4AP41235 SNORA31.18-201ENST00000517043 134 ntBASIC2.94□□□□□ -1.94
HNF4AP41235 AC009812.2-201ENST00000517657 457 ntBASIC2.94□□□□□ -1.94
HNF4AP41235 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.94□□□□□ -1.94
HNF4AP41235 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.94□□□□□ -1.94
HNF4AP41235 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.94□□□□□ -1.94
HNF4AP41235 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.94□□□□□ -1.94
HNF4AP41235 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.94□□□□□ -1.94
HNF4AP41235 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.94□□□□□ -1.94
HNF4AP41235 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.94□□□□□ -1.94
HNF4AP41235 AC074050.1-201ENST00000563247 211 ntBASIC2.94□□□□□ -1.94
HNF4AP41235 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.94□□□□□ -1.94
HNF4AP41235 MIR5004-201ENST00000579078 107 ntBASIC2.94□□□□□ -1.94
HNF4AP41235 AC121334.2-201ENST00000605387 271 ntBASIC2.94□□□□□ -1.94
HNF4AP41235 YPEL5P2-201ENST00000605553 359 ntBASIC2.94□□□□□ -1.94
HNF4AP41235 AC007684.1-201ENST00000609671 477 ntBASIC2.94□□□□□ -1.94
HNF4AP41235 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.94□□□□□ -1.94
HNF4AP41235 AL442067.2-201ENST00000614033 363 ntBASIC2.94□□□□□ -1.94
HNF4AP41235 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.94□□□□□ -1.94
HNF4AP41235 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.94□□□□□ -1.94
HNF4AP41235 SEPT14P19-203ENST00000633205 211 ntBASIC2.94□□□□□ -1.94
HNF4AP41235 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
HNF4AP41235 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.94□□□□□ -1.94
HNF4AP41235 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
HNF4AP41235 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HNF4AP41235 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HNF4AP41235 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.93□□□□□ -1.94
HNF4AP41235 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HNF4AP41235 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
HNF4AP41235 RNU5A-8P-201ENST00000364102 114 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 RNY4P16-201ENST00000364768 94 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
HNF4AP41235 Y_RNA.554-201ENST00000384672 102 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 RNU6-278P-201ENST00000390945 109 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 RNU6-750P-201ENST00000390946 107 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 RPL23AP32-201ENST00000395315 459 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 MIR548F1-201ENST00000408667 84 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.93□□□□□ -1.94
HNF4AP41235 AC023141.4-201ENST00000412031 328 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.93□□□□□ -1.94
HNF4AP41235 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.93□□□□□ -1.94
HNF4AP41235 AC096649.2-201ENST00000416186 393 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.93□□□□□ -1.94
HNF4AP41235 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.93□□□□□ -1.94
HNF4AP41235 RPL31P35-201ENST00000431058 377 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.93□□□□□ -1.94
HNF4AP41235 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.93□□□□□ -1.94
HNF4AP41235 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.93□□□□□ -1.94
HNF4AP41235 AL671855.1-201ENST00000446875 1203 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 RPL37P4-201ENST00000448908 268 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.93□□□□□ -1.94
HNF4AP41235 RBM43P1-201ENST00000476891 1081 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HNF4AP41235 AC010587.1-201ENST00000505809 469 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 AC108078.1-201ENST00000508073 725 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HNF4AP41235 RN7SKP57-201ENST00000517248 293 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 SCARNA11.3-201ENST00000517276 130 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 MTND4LP26-201ENST00000518144 282 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.93□□□□□ -1.94
HNF4AP41235 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.93□□□□□ -1.94
HNF4AP41235 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.93□□□□□ -1.94
HNF4AP41235 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.93□□□□□ -1.94
HNF4AP41235 AC087883.1-201ENST00000551882 391 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 NACAP3-201ENST00000552100 481 ntBASIC2.93□□□□□ -1.94
HNF4AP41235 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms