Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.66□□□□□ -1.5
CLCN1P35523 U3.37-201ENST00000408528 213 ntBASIC5.66□□□□□ -1.5
CLCN1P35523 TOMM22P1-201ENST00000418578 312 ntBASIC5.66□□□□□ -1.5
CLCN1P35523 EIF1AXP1-201ENST00000419267 435 ntBASIC5.66□□□□□ -1.5
CLCN1P35523 SNRPEP9-201ENST00000436794 238 ntBASIC5.66□□□□□ -1.5
CLCN1P35523 AL451050.1-201ENST00000450126 415 ntBASIC5.66□□□□□ -1.5
CLCN1P35523 snoU13.24-201ENST00000458998 104 ntBASIC5.66□□□□□ -1.5
CLCN1P35523 HMGB1P22-201ENST00000505315 124 ntBASIC5.66□□□□□ -1.5
CLCN1P35523 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.66□□□□□ -1.5
CLCN1P35523 SNORA43.2-201ENST00000516652 128 ntBASIC5.66□□□□□ -1.5
CLCN1P35523 RNA5SP392-201ENST00000516905 112 ntBASIC5.66□□□□□ -1.5
CLCN1P35523 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.66□□□□□ -1.5
CLCN1P35523 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.66□□□□□ -1.5
CLCN1P35523 MTND6P33-201ENST00000571794 183 ntBASIC5.66□□□□□ -1.5
CLCN1P35523 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CLCN1P35523 AC093799.2-201ENST00000610062 578 ntBASIC5.66□□□□□ -1.5
CLCN1P35523 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5.66□□□□□ -1.5
CLCN1P35523 AL049767.1-202ENST00000637826 242 ntBASIC5.66□□□□□ -1.5
CLCN1P35523 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CLCN1P35523 AC139713.2-214ENST00000642059 1811 ntBASIC5.66□□□□□ -1.5
CLCN1P35523 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLCN1P35523 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLCN1P35523 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
CLCN1P35523 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.66□□□□□ -1.5
CLCN1P35523 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCN1P35523 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLCN1P35523 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.66□□□□□ -1.5
CLCN1P35523 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLCN1P35523 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CLCN1P35523 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLCN1P35523 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLCN1P35523 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.65□□□□□ -1.5
CLCN1P35523 RNU6-1181P-201ENST00000384191 106 ntBASIC5.65□□□□□ -1.5
CLCN1P35523 RNU6-541P-201ENST00000384709 110 ntBASIC5.65□□□□□ -1.5
CLCN1P35523 MIR613-201ENST00000385248 95 ntBASIC5.65□□□□□ -1.5
CLCN1P35523 RNA5SP339-201ENST00000390987 122 ntBASIC5.65□□□□□ -1.5
CLCN1P35523 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLCN1P35523 RN7SKP51-201ENST00000410781 304 ntBASIC5.65□□□□□ -1.5
CLCN1P35523 RNU6-651P-201ENST00000411040 105 ntBASIC5.65□□□□□ -1.5
CLCN1P35523 RPL19P1-201ENST00000411635 428 ntBASIC5.65□□□□□ -1.5
CLCN1P35523 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC5.65□□□□□ -1.5
CLCN1P35523 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLCN1P35523 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.65□□□□□ -1.5
CLCN1P35523 NUTF2P3-201ENST00000448540 384 ntBASIC5.65□□□□□ -1.5
CLCN1P35523 snoU13.4-201ENST00000458916 104 ntBASIC5.65□□□□□ -1.5
CLCN1P35523 AC073901.1-201ENST00000462471 408 ntBASIC5.65□□□□□ -1.5
CLCN1P35523 AC087477.1-201ENST00000465747 340 ntBASIC5.65□□□□□ -1.5
CLCN1P35523 AC091021.1-201ENST00000468051 388 ntBASIC5.65□□□□□ -1.5
CLCN1P35523 AL132838.2-201ENST00000492041 314 ntBASIC5.65□□□□□ -1.5
CLCN1P35523 SNORA70.16-201ENST00000516390 95 ntBASIC5.65□□□□□ -1.5
CLCN1P35523 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.65□□□□□ -1.5
CLCN1P35523 HMGB1P40-201ENST00000525121 540 ntBASIC5.65□□□□□ -1.5
CLCN1P35523 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.65□□□□□ -1.5
CLCN1P35523 AC007225.2-201ENST00000562529 256 ntBASIC5.65□□□□□ -1.5
CLCN1P35523 RPL10P14-201ENST00000565265 298 ntBASIC5.65□□□□□ -1.5
CLCN1P35523 AC008785.1-201ENST00000624475 456 ntBASIC5.65□□□□□ -1.5
CLCN1P35523 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLCN1P35523 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLCN1P35523 AC107068.1-201ENST00000563286 4218 ntBASIC5.65□□□□□ -1.51
CLCN1P35523 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.51
CLCN1P35523 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CLCN1P35523 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLCN1P35523 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CLCN1P35523 MUC2-202ENST00000613187 4845 ntBASIC5.64□□□□□ -1.51
CLCN1P35523 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLCN1P35523 AL079305.1-201ENST00000623159 3008 ntBASIC5.64□□□□□ -1.51
CLCN1P35523 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.64□□□□□ -1.51
CLCN1P35523 AC007390.2-201ENST00000606229 3803 ntBASIC5.64□□□□□ -1.51
CLCN1P35523 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLCN1P35523 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLCN1P35523 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLCN1P35523 AL353743.1-202ENST00000431724 1695 ntBASIC5.64□□□□□ -1.51
CLCN1P35523 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLCN1P35523 Y_RNA.275-201ENST00000364726 110 ntBASIC5.64□□□□□ -1.51
CLCN1P35523 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.64□□□□□ -1.51
CLCN1P35523 RNA5SP31-201ENST00000411144 127 ntBASIC5.64□□□□□ -1.51
CLCN1P35523 AL355433.1-201ENST00000422804 300 ntBASIC5.64□□□□□ -1.51
CLCN1P35523 AF186996.7-201ENST00000492781 209 ntBASIC5.64□□□□□ -1.51
CLCN1P35523 RAB9BP1-201ENST00000519581 626 ntBASIC5.64□□□□□ -1.51
CLCN1P35523 AP004607.1-201ENST00000524456 203 ntBASIC5.64□□□□□ -1.51
CLCN1P35523 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.64□□□□□ -1.51
CLCN1P35523 AL078605.1-201ENST00000603529 500 ntBASIC5.64□□□□□ -1.51
CLCN1P35523 AC136601.2-201ENST00000604356 474 ntBASIC5.64□□□□□ -1.51
CLCN1P35523 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.64□□□□□ -1.51
CLCN1P35523 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.64□□□□□ -1.51
CLCN1P35523 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLCN1P35523 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLCN1P35523 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CLCN1P35523 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CLCN1P35523 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CLCN1P35523 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLCN1P35523 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLCN1P35523 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CLCN1P35523 RNY1P5-201ENST00000383890 115 ntBASIC5.63□□□□□ -1.51
CLCN1P35523 MIR93-201ENST00000385024 80 ntBASIC5.63□□□□□ -1.51
CLCN1P35523 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CLCN1P35523 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.63□□□□□ -1.51
CLCN1P35523 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.63□□□□□ -1.51
CLCN1P35523 RNU6-1245P-201ENST00000411130 106 ntBASIC5.63□□□□□ -1.51
CLCN1P35523 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms