Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXA11P31270 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA11P31270 MIR4425-201ENST00000580572 84 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 VN1R80P-201ENST00000597126 338 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 AL133393.1-201ENST00000603277 287 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 AC106900.2-201ENST00000604994 317 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 AC004908.2-201ENST00000609090 574 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 AC009570.1-201ENST00000609599 745 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 AC135507.2-201ENST00000612443 309 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 AL162274.2-201ENST00000614406 332 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 MIR622-201ENST00000638396 96 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
HOXA11P31270 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXA11P31270 ZNF826P-207ENST00000622273 1910 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 RIOK3P1-201ENST00000418778 1528 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXA11P31270 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXA11P31270 SNORD81.2-201ENST00000365153 76 ntBASIC3.43□□□□□ -1.86
HOXA11P31270 Y_RNA.381-201ENST00000365666 102 ntBASIC3.43□□□□□ -1.86
HOXA11P31270 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXA11P31270 AP002088.1-201ENST00000382740 395 ntBASIC3.43□□□□□ -1.86
HOXA11P31270 Y_RNA.529-201ENST00000384586 119 ntBASIC3.43□□□□□ -1.86
HOXA11P31270 MIR454-201ENST00000390180 115 ntBASIC3.43□□□□□ -1.86
HOXA11P31270 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HOXA11P31270 HSPE1P1-201ENST00000421494 318 ntBASIC3.43□□□□□ -1.86
HOXA11P31270 TMEM167AP1-201ENST00000423409 219 ntBASIC3.43□□□□□ -1.86
HOXA11P31270 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXA11P31270 RAC1P7-201ENST00000445367 377 ntBASIC3.43□□□□□ -1.86
HOXA11P31270 AC016696.1-201ENST00000446949 318 ntBASIC3.43□□□□□ -1.86
HOXA11P31270 AC073415.1-201ENST00000449240 153 ntBASIC3.43□□□□□ -1.86
HOXA11P31270 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXA11P31270 RNU7-59P-201ENST00000459101 61 ntBASIC3.43□□□□□ -1.86
HOXA11P31270 RPL30P14-201ENST00000482744 348 ntBASIC3.43□□□□□ -1.86
HOXA11P31270 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXA11P31270 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXA11P31270 AC017037.2-201ENST00000513850 890 ntBASIC3.43□□□□□ -1.86
HOXA11P31270 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXA11P31270 RNA5SP401-201ENST00000515920 127 ntBASIC3.43□□□□□ -1.86
HOXA11P31270 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.43□□□□□ -1.86
HOXA11P31270 SUB1P1-201ENST00000524415 382 ntBASIC3.43□□□□□ -1.86
HOXA11P31270 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXA11P31270 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXA11P31270 AL590099.1-201ENST00000615276 138 ntBASIC3.43□□□□□ -1.86
HOXA11P31270 U7.8-201ENST00000619968 63 ntBASIC3.43□□□□□ -1.86
HOXA11P31270 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXA11P31270 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXA11P31270 AC112487.2-201ENST00000637950 304 ntBASIC3.43□□□□□ -1.86
HOXA11P31270 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXA11P31270 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXA11P31270 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXA11P31270 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXA11P31270 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXA11P31270 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
HOXA11P31270 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXA11P31270 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HOXA11P31270 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXA11P31270 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXA11P31270 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXA11P31270 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 RNU6-223P-201ENST00000362830 107 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 RNU6-996P-201ENST00000365438 107 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 RNU6-39P-201ENST00000384344 107 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 SNORA1.3-201ENST00000384676 136 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 MIR514A2-201ENST00000385131 88 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 MIR514A3-201ENST00000385132 88 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 RN7SKP32-201ENST00000410167 303 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 RNU2-9P-201ENST00000410194 145 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 RN7SKP220-201ENST00000410611 288 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 RNU6-193P-201ENST00000410977 107 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXA11P31270 AC008850.1-201ENST00000427546 362 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXA11P31270 TAAR7P-201ENST00000436141 242 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 HMGB3P8-201ENST00000449709 577 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXA11P31270 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXA11P31270 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXA11P31270 AC126389.1-201ENST00000477436 290 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXA11P31270 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXA11P31270 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXA11P31270 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXA11P31270 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.42□□□□□ -1.86
HOXA11P31270 AP000857.1-201ENST00000532151 543 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 OR5AL2P-201ENST00000532185 920 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 MED28P6-201ENST00000558776 231 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 ANP32BP3-201ENST00000559213 706 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.42□□□□□ -1.86
HOXA11P31270 Z84480.1-201ENST00000605131 311 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 AC021646.1-201ENST00000605469 484 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 AP002826.1-201ENST00000608835 315 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 AL132765.2-201ENST00000610812 351 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 ATP5A1P2-202ENST00000616464 443 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXA11P31270 AC112204.3-201ENST00000623822 332 ntBASIC3.42□□□□□ -1.86
HOXA11P31270 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXA11P31270 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXA11P31270 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HOXA11P31270 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms