Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.71□□□□□ -1.98
SHC1P29353 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.71□□□□□ -1.98
SHC1P29353 MIR4325-201ENST00000583049 90 ntBASIC2.71□□□□□ -1.98
SHC1P29353 BNIP3P9-201ENST00000603714 553 ntBASIC2.71□□□□□ -1.98
SHC1P29353 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.71□□□□□ -1.98
SHC1P29353 AC004908.2-201ENST00000609090 574 ntBASIC2.71□□□□□ -1.98
SHC1P29353 AC069234.5-201ENST00000611056 416 ntBASIC2.71□□□□□ -1.98
SHC1P29353 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.71□□□□□ -1.98
SHC1P29353 AC104260.1-201ENST00000616660 539 ntBASIC2.71□□□□□ -1.98
SHC1P29353 YWHAEP7-203ENST00000622054 312 ntBASIC2.71□□□□□ -1.98
SHC1P29353 AC005609.4-201ENST00000625071 447 ntBASIC2.71□□□□□ -1.98
SHC1P29353 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.71□□□□□ -1.98
SHC1P29353 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.71□□□□□ -1.98
SHC1P29353 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
SHC1P29353 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SHC1P29353 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.7□□□□□ -1.98
SHC1P29353 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SHC1P29353 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.7□□□□□ -1.98
SHC1P29353 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.7□□□□□ -1.98
SHC1P29353 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SHC1P29353 SNORA71.1-201ENST00000364523 117 ntBASIC2.7□□□□□ -1.98
SHC1P29353 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
SHC1P29353 MIR135A2-201ENST00000384854 100 ntBASIC2.7□□□□□ -1.98
SHC1P29353 MIR23A-201ENST00000385245 73 ntBASIC2.7□□□□□ -1.98
SHC1P29353 RNU6-278P-201ENST00000390945 109 ntBASIC2.7□□□□□ -1.98
SHC1P29353 RNU6-754P-201ENST00000391166 107 ntBASIC2.7□□□□□ -1.98
SHC1P29353 AL031121.1-201ENST00000406553 254 ntBASIC2.7□□□□□ -1.98
SHC1P29353 RPS3AP24-201ENST00000407896 734 ntBASIC2.7□□□□□ -1.98
SHC1P29353 RNU2-62P-201ENST00000410868 191 ntBASIC2.7□□□□□ -1.98
SHC1P29353 RNU6-1068P-201ENST00000410958 103 ntBASIC2.7□□□□□ -1.98
SHC1P29353 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.7□□□□□ -1.98
SHC1P29353 AL139281.1-201ENST00000422120 335 ntBASIC2.7□□□□□ -1.98
SHC1P29353 AC137499.1-201ENST00000427602 88 ntBASIC2.7□□□□□ -1.98
SHC1P29353 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.7□□□□□ -1.98
SHC1P29353 RPS20P5-201ENST00000434808 360 ntBASIC2.7□□□□□ -1.98
SHC1P29353 HIGD1AP11-201ENST00000438361 280 ntBASIC2.7□□□□□ -1.98
SHC1P29353 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.7□□□□□ -1.98
SHC1P29353 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.7□□□□□ -1.98
SHC1P29353 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.7□□□□□ -1.98
SHC1P29353 CACYBPP2-201ENST00000453625 678 ntBASIC2.7□□□□□ -1.98
SHC1P29353 AC006483.1-201ENST00000487308 313 ntBASIC2.7□□□□□ -1.98
SHC1P29353 AC091951.2-201ENST00000500762 203 ntBASIC2.7□□□□□ -1.98
SHC1P29353 MLLT10P2-201ENST00000506434 249 ntBASIC2.7□□□□□ -1.98
SHC1P29353 MTND4LP22-201ENST00000508209 276 ntBASIC2.7□□□□□ -1.98
SHC1P29353 SNORA31.8-201ENST00000516327 108 ntBASIC2.7□□□□□ -1.98
SHC1P29353 SNORA40.12-201ENST00000516329 111 ntBASIC2.7□□□□□ -1.98
SHC1P29353 RN7SKP272-201ENST00000516988 232 ntBASIC2.7□□□□□ -1.98
SHC1P29353 RNU6-64P-201ENST00000517119 105 ntBASIC2.7□□□□□ -1.98
SHC1P29353 DEFB108D-201ENST00000527787 222 ntBASIC2.7□□□□□ -1.98
SHC1P29353 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SHC1P29353 SNRPGP16-201ENST00000533275 226 ntBASIC2.7□□□□□ -1.98
SHC1P29353 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SHC1P29353 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.7□□□□□ -1.98
SHC1P29353 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.7□□□□□ -1.98
SHC1P29353 MIR4293-201ENST00000584305 78 ntBASIC2.7□□□□□ -1.98
SHC1P29353 AC105224.1-201ENST00000587055 421 ntBASIC2.7□□□□□ -1.98
SHC1P29353 AC060780.3-201ENST00000589464 80 ntBASIC2.7□□□□□ -1.98
SHC1P29353 AL031176.1-201ENST00000604554 466 ntBASIC2.7□□□□□ -1.98
SHC1P29353 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.7□□□□□ -1.98
SHC1P29353 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.7□□□□□ -1.98
SHC1P29353 ZNF807-201ENST00000328088 1707 ntBASIC2.7□□□□□ -1.98
SHC1P29353 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.7□□□□□ -1.98
SHC1P29353 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.69□□□□□ -1.98
SHC1P29353 CKAP2P1-201ENST00000555477 2049 ntBASIC2.69□□□□□ -1.98
SHC1P29353 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.69□□□□□ -1.98
SHC1P29353 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.69□□□□□ -1.98
SHC1P29353 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SHC1P29353 Y_RNA.160-201ENST00000363677 92 ntBASIC2.69□□□□□ -1.98
SHC1P29353 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.69□□□□□ -1.98
SHC1P29353 RNU6-637P-201ENST00000384050 107 ntBASIC2.69□□□□□ -1.98
SHC1P29353 AL138885.1-201ENST00000405921 675 ntBASIC2.69□□□□□ -1.98
SHC1P29353 RPL5P18-201ENST00000406671 891 ntBASIC2.69□□□□□ -1.98
SHC1P29353 RNU2-36P-201ENST00000410361 191 ntBASIC2.69□□□□□ -1.98
SHC1P29353 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.69□□□□□ -1.98
SHC1P29353 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.69□□□□□ -1.98
SHC1P29353 USP12PX-201ENST00000432383 1057 ntBASIC2.69□□□□□ -1.98
SHC1P29353 MTATP6P16-201ENST00000434543 526 ntBASIC2.69□□□□□ -1.98
SHC1P29353 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.69□□□□□ -1.98
SHC1P29353 SNRPGP6-201ENST00000451124 220 ntBASIC2.69□□□□□ -1.98
SHC1P29353 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.69□□□□□ -1.98
SHC1P29353 RPL23AP31-201ENST00000456160 467 ntBASIC2.69□□□□□ -1.98
SHC1P29353 AC108059.3-201ENST00000456388 214 ntBASIC2.69□□□□□ -1.98
SHC1P29353 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.69□□□□□ -1.98
SHC1P29353 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.69□□□□□ -1.98
SHC1P29353 RNU6-261P-201ENST00000459506 102 ntBASIC2.69□□□□□ -1.98
SHC1P29353 RPL27AP5-201ENST00000469428 449 ntBASIC2.69□□□□□ -1.98
SHC1P29353 AC233702.1-201ENST00000482905 502 ntBASIC2.69□□□□□ -1.98
SHC1P29353 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.69□□□□□ -1.98
SHC1P29353 RPS15AP36-201ENST00000492022 382 ntBASIC2.69□□□□□ -1.98
SHC1P29353 AC018710.1-201ENST00000506509 158 ntBASIC2.69□□□□□ -1.98
SHC1P29353 KLHL2P1-201ENST00000508691 521 ntBASIC2.69□□□□□ -1.98
SHC1P29353 RNU6-1095P-201ENST00000516148 108 ntBASIC2.69□□□□□ -1.98
SHC1P29353 RNU6-410P-201ENST00000517006 107 ntBASIC2.69□□□□□ -1.98
SHC1P29353 FAM60DP-201ENST00000524174 632 ntBASIC2.69□□□□□ -1.98
SHC1P29353 AP001646.1-201ENST00000527936 915 ntBASIC2.69□□□□□ -1.98
SHC1P29353 OR4R1P-201ENST00000529879 463 ntBASIC2.69□□□□□ -1.98
SHC1P29353 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.69□□□□□ -1.98
SHC1P29353 AC007536.1-201ENST00000533382 349 ntBASIC2.69□□□□□ -1.98
SHC1P29353 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.69□□□□□ -1.98
SHC1P29353 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms