Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC108747.1-201ENST00000609508 535 ntBASIC2.62□□□□□ -1.99
PTPN4P29074 AL137847.3-201ENST00000611521 109 ntBASIC2.62□□□□□ -1.99
PTPN4P29074 AC025594.3-201ENST00000613068 790 ntBASIC2.62□□□□□ -1.99
PTPN4P29074 AC027807.2-201ENST00000616099 408 ntBASIC2.62□□□□□ -1.99
PTPN4P29074 AC091931.1-201ENST00000623488 728 ntBASIC2.62□□□□□ -1.99
PTPN4P29074 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.62□□□□□ -1.99
PTPN4P29074 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
PTPN4P29074 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.61□□□□□ -1.99
PTPN4P29074 RNU4-82P-201ENST00000362443 140 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 RNU4-21P-201ENST00000362802 126 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 RNU5F-7P-201ENST00000363696 115 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 RNU1-100P-201ENST00000365255 165 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 MT-TH-201ENST00000387441 69 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 RNA5SP210-201ENST00000391034 120 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 RNU6-817P-201ENST00000391083 104 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 RNA5SP21-201ENST00000410917 96 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.61□□□□□ -1.99
PTPN4P29074 RPL26P27-201ENST00000414397 437 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.61□□□□□ -1.99
PTPN4P29074 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.61□□□□□ -1.99
PTPN4P29074 AC104651.1-201ENST00000427559 735 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 SUMO1P4-201ENST00000429430 302 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 ARL5AP4-201ENST00000430731 512 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 RPS15AP5-201ENST00000436276 388 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 RPS12P2-201ENST00000439728 269 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 UBE2D3P4-201ENST00000441973 436 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 DPPA3P1-201ENST00000448050 469 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 SNRPFP4-201ENST00000456366 242 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.61□□□□□ -1.99
PTPN4P29074 RNU6-953P-201ENST00000459154 107 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 AC022447.1-201ENST00000515358 464 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 RNU2-10P-201ENST00000516375 211 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.61□□□□□ -1.99
PTPN4P29074 AC123904.2-201ENST00000548059 300 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.61□□□□□ -1.99
PTPN4P29074 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.61□□□□□ -1.99
PTPN4P29074 Z99497.2-201ENST00000603634 310 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 AC012360.2-201ENST00000609349 391 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.61□□□□□ -1.99
PTPN4P29074 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.61□□□□□ -1.99
PTPN4P29074 MIR7515-201ENST00000637837 67 ntBASIC2.61□□□□□ -1.99
PTPN4P29074 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
PTPN4P29074 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.61□□□□□ -1.99
PTPN4P29074 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PTPN4P29074 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.6□□□□□ -1.99
PTPN4P29074 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
PTPN4P29074 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.6□□□□□ -1.99
PTPN4P29074 RNU1-112P-201ENST00000364401 164 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 RNU5E-5P-201ENST00000365379 116 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 MIR34A-201ENST00000385130 110 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 SNORA26.8-201ENST00000391306 124 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.6□□□□□ -1.99
PTPN4P29074 AL021407.1-201ENST00000404531 386 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.6□□□□□ -1.99
PTPN4P29074 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.6□□□□□ -1.99
PTPN4P29074 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
PTPN4P29074 AC096649.2-201ENST00000416186 393 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 NPM1P11-201ENST00000417106 855 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 AC009518.2-201ENST00000418056 731 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 CYCSP46-201ENST00000423569 204 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 RAC1P6-201ENST00000423911 575 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 AC137499.1-201ENST00000427602 88 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.6□□□□□ -1.99
PTPN4P29074 AP000936.2-201ENST00000447151 681 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 AL590365.1-201ENST00000450788 243 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 RPS27AP8-201ENST00000452665 445 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 MTND1P12-201ENST00000455231 147 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.6□□□□□ -1.99
PTPN4P29074 AC128713.1-201ENST00000471495 306 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 AC126389.1-201ENST00000477436 290 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.6□□□□□ -1.99
PTPN4P29074 AC010486.3-201ENST00000511602 785 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 SNORA31.3-201ENST00000516029 96 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 SCARNA11.3-201ENST00000517276 130 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.6□□□□□ -1.99
PTPN4P29074 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.6□□□□□ -1.99
PTPN4P29074 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.6□□□□□ -1.99
PTPN4P29074 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.6□□□□□ -1.99
PTPN4P29074 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.6□□□□□ -1.99
PTPN4P29074 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.6□□□□□ -1.99
PTPN4P29074 MIR4435-1-201ENST00000582552 80 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.6□□□□□ -1.99
PTPN4P29074 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.6□□□□□ -1.99
PTPN4P29074 AC012065.4-201ENST00000602445 679 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 AC092140.2-201ENST00000618027 521 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PTPN4P29074 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PTPN4P29074 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.6□□□□□ -1.99
PTPN4P29074 MTND4P4-201ENST00000439033 1366 ntBASIC2.6□□□□□ -1.99
PTPN4P29074 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PTPN4P29074 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.59□□□□□ -1.99
PTPN4P29074 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.59□□□□□ -1.99
PTPN4P29074 RNU6-884P-201ENST00000363889 107 ntBASIC2.59□□□□□ -1.99
PTPN4P29074 Y_RNA.608-201ENST00000410647 95 ntBASIC2.59□□□□□ -1.99
PTPN4P29074 RNU2-68P-201ENST00000410878 191 ntBASIC2.59□□□□□ -1.99
PTPN4P29074 BTF3L4P3-201ENST00000418879 476 ntBASIC2.59□□□□□ -1.99
PTPN4P29074 SEPT2P1-201ENST00000419651 180 ntBASIC2.59□□□□□ -1.99
PTPN4P29074 AC090960.1-201ENST00000421072 306 ntBASIC2.59□□□□□ -1.99
PTPN4P29074 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms