Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC090071.1-201ENST00000507713 644 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.81□□□□□ -2.12
COL5A1P20908 RAC1P5-201ENST00000512182 576 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.81□□□□□ -2.12
COL5A1P20908 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.81□□□□□ -2.12
COL5A1P20908 AC022878.1-201ENST00000530684 149 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.81□□□□□ -2.12
COL5A1P20908 AC008127.2-201ENST00000549925 1075 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 AC091489.2-201ENST00000566263 604 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.81□□□□□ -2.12
COL5A1P20908 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.81□□□□□ -2.12
COL5A1P20908 AC068790.2-201ENST00000602601 557 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 AP000811.1-201ENST00000603803 651 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 SNRPGP19-201ENST00000603826 189 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 AC103710.4-201ENST00000609301 899 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 AC008443.7-201ENST00000622195 246 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.81□□□□□ -2.12
COL5A1P20908 AC131280.1-202ENST00000624067 4211 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
COL5A1P20908 AP002907.1-201ENST00000606361 1430 ntBASIC1.81□□□□□ -2.12
COL5A1P20908 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
COL5A1P20908 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
COL5A1P20908 AC130650.2-201ENST00000618736 2403 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 RNU6-623P-201ENST00000363143 105 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 U3.4-201ENST00000363352 213 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 RNU6-553P-201ENST00000364047 96 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 RNU6-1226P-201ENST00000384317 107 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 MIR607-201ENST00000385241 96 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 AL121972.1-201ENST00000402023 252 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 RNU2-21P-201ENST00000410368 188 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 RPL7P30-201ENST00000420888 709 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.8□□□□□ -2.12
COL5A1P20908 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.8□□□□□ -2.12
COL5A1P20908 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.8□□□□□ -2.12
COL5A1P20908 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.8□□□□□ -2.12
COL5A1P20908 MTCO2P16-201ENST00000436962 677 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 THAP5P1-201ENST00000439089 262 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 PGBD4P3-201ENST00000440731 581 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 AC118469.1-201ENST00000442943 488 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 RPS26P56-201ENST00000444468 240 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 VN1R10P-201ENST00000447106 875 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.8□□□□□ -2.12
COL5A1P20908 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.8□□□□□ -2.12
COL5A1P20908 SNRPFP4-201ENST00000456366 242 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 RNU7-136P-201ENST00000458819 69 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.8□□□□□ -2.12
COL5A1P20908 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.8□□□□□ -2.12
COL5A1P20908 ARL2BPP4-201ENST00000506854 471 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.8□□□□□ -2.12
COL5A1P20908 CBX3P3-201ENST00000508108 532 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.8□□□□□ -2.12
COL5A1P20908 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.8□□□□□ -2.12
COL5A1P20908 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.8□□□□□ -2.12
COL5A1P20908 AC022447.1-201ENST00000515358 464 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 RNU6-678P-201ENST00000516832 109 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.8□□□□□ -2.12
COL5A1P20908 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.8□□□□□ -2.12
COL5A1P20908 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.8□□□□□ -2.12
COL5A1P20908 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.8□□□□□ -2.12
COL5A1P20908 CENPUP2-201ENST00000555897 1186 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 HSPE1P3-201ENST00000559254 309 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.8□□□□□ -2.12
COL5A1P20908 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 AC006023.2-201ENST00000609916 167 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
COL5A1P20908 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
COL5A1P20908 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
COL5A1P20908 SET-203ENST00000372688 801 ntTSL 2 BASIC1.8□□□□□ -2.12
COL5A1P20908 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.8□□□□□ -2.12
COL5A1P20908 AC006366.1-201ENST00000422002 759 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.8□□□□□ -2.12
COL5A1P20908 AL356583.2-201ENST00000426536 280 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 LARP1BP3-201ENST00000437229 869 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
COL5A1P20908 AC026410.2-201ENST00000460281 156 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 RPL21P93-201ENST00000480465 489 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 AC233702.1-201ENST00000482905 502 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 AC093591.1-201ENST00000491435 481 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.8□□□□□ -2.12
COL5A1P20908 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.8□□□□□ -2.12
COL5A1P20908 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.8□□□□□ -2.12
COL5A1P20908 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.8□□□□□ -2.12
COL5A1P20908 AC024589.1-201ENST00000512207 263 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 Y_RNA.695-201ENST00000516715 107 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 RN7SKP277-201ENST00000516895 283 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 RNU6-250P-201ENST00000516958 103 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 AC106038.2-201ENST00000520706 568 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.8□□□□□ -2.12
COL5A1P20908 ARL2BPP2-201ENST00000550907 489 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.8□□□□□ -2.12
COL5A1P20908 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.8□□□□□ -2.12
COL5A1P20908 AC012065.4-201ENST00000602445 679 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 AC080013.4-201ENST00000607624 649 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 AC103591.3-201ENST00000608684 209 ntBASIC1.8□□□□□ -2.12
COL5A1P20908 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
COL5A1P20908 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.8□□□□□ -2.12
COL5A1P20908 FAM157B-203ENST00000639350 358 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms