Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.15□□□□□ -1.9
CAPN3P20807 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.15□□□□□ -1.9
CAPN3P20807 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
CAPN3P20807 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.15□□□□□ -1.91
CAPN3P20807 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.15□□□□□ -1.91
CAPN3P20807 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CAPN3P20807 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.15□□□□□ -1.91
CAPN3P20807 MIR412-201ENST00000362142 91 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 Y_RNA.22-201ENST00000362492 102 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 SNORD17-201ENST00000390930 237 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 SNORA40C-201ENST00000391285 128 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.15□□□□□ -1.91
CAPN3P20807 AC114491.1-201ENST00000416095 246 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 COTL1P1-201ENST00000422309 375 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.15□□□□□ -1.91
CAPN3P20807 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.15□□□□□ -1.91
CAPN3P20807 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CAPN3P20807 AC233279.1-201ENST00000455300 423 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 RN7SL429P-201ENST00000479090 223 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 AC025518.1-201ENST00000479856 347 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 AC004924.1-201ENST00000480160 781 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 RN7SL489P-201ENST00000486185 223 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 RN7SL327P-201ENST00000488659 223 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 AC080014.1-201ENST00000496877 1201 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.15□□□□□ -1.91
CAPN3P20807 RNA5SP217-201ENST00000515959 91 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 RNU6-123P-201ENST00000516163 102 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.15□□□□□ -1.91
CAPN3P20807 OR5BN1P-201ENST00000532955 829 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 MIR3913-1-201ENST00000577744 102 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 AC015917.1-201ENST00000579654 510 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 MIR548AC-201ENST00000585049 88 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 AC006566.1-201ENST00000608943 513 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.15□□□□□ -1.91
CAPN3P20807 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 uc_338.1-201ENST00000612113 180 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 RN7SL853P-201ENST00000617250 223 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 MIR6134-201ENST00000617606 109 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 AC022079.1-201ENST00000621546 602 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.15□□□□□ -1.91
CAPN3P20807 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CAPN3P20807 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.15□□□□□ -1.91
CAPN3P20807 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
CAPN3P20807 ASNSP3-201ENST00000451989 1306 ntBASIC3.15□□□□□ -1.91
CAPN3P20807 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CAPN3P20807 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.14□□□□□ -1.91
CAPN3P20807 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CAPN3P20807 AL390237.1-201ENST00000404226 1415 ntBASIC3.14□□□□□ -1.91
CAPN3P20807 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CAPN3P20807 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.14□□□□□ -1.91
CAPN3P20807 U3.6-201ENST00000363622 211 ntBASIC3.14□□□□□ -1.91
CAPN3P20807 RNU6-1280P-201ENST00000365211 107 ntBASIC3.14□□□□□ -1.91
CAPN3P20807 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.14□□□□□ -1.91
CAPN3P20807 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CAPN3P20807 AL513475.1-201ENST00000406602 315 ntBASIC3.14□□□□□ -1.91
CAPN3P20807 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CAPN3P20807 AC007899.1-201ENST00000412776 775 ntBASIC3.14□□□□□ -1.91
CAPN3P20807 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.14□□□□□ -1.91
CAPN3P20807 AL160275.3-201ENST00000423876 471 ntBASIC3.14□□□□□ -1.91
CAPN3P20807 AC092427.1-202ENST00000430569 476 ntBASIC3.14□□□□□ -1.91
CAPN3P20807 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.14□□□□□ -1.91
CAPN3P20807 RPS15AP7-201ENST00000439294 405 ntBASIC3.14□□□□□ -1.91
CAPN3P20807 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.14□□□□□ -1.91
CAPN3P20807 AC008155.2-201ENST00000464337 397 ntBASIC3.14□□□□□ -1.91
CAPN3P20807 AC107626.1-201ENST00000471084 183 ntBASIC3.14□□□□□ -1.91
CAPN3P20807 EIF4EP3-201ENST00000498782 656 ntBASIC3.14□□□□□ -1.91
CAPN3P20807 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.14□□□□□ -1.91
CAPN3P20807 IGKV2-26-201ENST00000518305 343 ntBASIC3.14□□□□□ -1.91
CAPN3P20807 AP001646.1-201ENST00000527936 915 ntBASIC3.14□□□□□ -1.91
CAPN3P20807 AL356057.1-201ENST00000533798 831 ntBASIC3.14□□□□□ -1.91
CAPN3P20807 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.14□□□□□ -1.91
CAPN3P20807 AC110760.3-201ENST00000598794 467 ntBASIC3.14□□□□□ -1.91
CAPN3P20807 AL645944.1-201ENST00000603857 493 ntBASIC3.14□□□□□ -1.91
CAPN3P20807 uc_338.14-201ENST00000613162 166 ntBASIC3.14□□□□□ -1.91
CAPN3P20807 AL449363.1-201ENST00000617815 186 ntBASIC3.14□□□□□ -1.91
CAPN3P20807 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CAPN3P20807 AL356321.1-201ENST00000621360 228 ntBASIC3.14□□□□□ -1.91
CAPN3P20807 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CAPN3P20807 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.14□□□□□ -1.91
CAPN3P20807 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CAPN3P20807 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CAPN3P20807 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CAPN3P20807 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CAPN3P20807 RNU4-35P-201ENST00000362588 141 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 RNU6-7-201ENST00000364784 107 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 RNU6-8-201ENST00000365467 107 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 RNU6-61P-201ENST00000365528 109 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CAPN3P20807 SNORD116-9-201ENST00000384000 95 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 SNORD116-3-201ENST00000384287 95 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 SNORD116-7-201ENST00000384404 95 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 SNORD116-5-201ENST00000384462 95 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 CISD1P1-201ENST00000393907 327 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 BX295541.1-201ENST00000417774 250 ntBASIC3.13□□□□□ -1.91
CAPN3P20807 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.13□□□□□ -1.91
CAPN3P20807 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.13□□□□□ -1.91
CAPN3P20807 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms