Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AC026801.1-201ENST00000497178 464 ntBASIC4.88□□□□□ -1.63
LMNB1P20700 SUMO2P6-201ENST00000505273 288 ntBASIC4.88□□□□□ -1.63
LMNB1P20700 MTND3P25-201ENST00000509243 135 ntBASIC4.88□□□□□ -1.63
LMNB1P20700 Y_RNA.661-201ENST00000516003 99 ntBASIC4.88□□□□□ -1.63
LMNB1P20700 RNU6-699P-201ENST00000517081 110 ntBASIC4.88□□□□□ -1.63
LMNB1P20700 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LMNB1P20700 AC087854.1-201ENST00000519706 414 ntBASIC4.88□□□□□ -1.63
LMNB1P20700 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.88□□□□□ -1.63
LMNB1P20700 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.88□□□□□ -1.63
LMNB1P20700 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
LMNB1P20700 MIR4513-201ENST00000581077 86 ntBASIC4.88□□□□□ -1.63
LMNB1P20700 AC011494.1-201ENST00000596454 237 ntBASIC4.88□□□□□ -1.63
LMNB1P20700 ELOCP5-201ENST00000604924 333 ntBASIC4.88□□□□□ -1.63
LMNB1P20700 AC091167.4-201ENST00000605079 184 ntBASIC4.88□□□□□ -1.63
LMNB1P20700 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.88□□□□□ -1.63
LMNB1P20700 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LMNB1P20700 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.88□□□□□ -1.63
LMNB1P20700 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LMNB1P20700 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
LMNB1P20700 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
LMNB1P20700 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.87□□□□□ -1.63
LMNB1P20700 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LMNB1P20700 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LMNB1P20700 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.87□□□□□ -1.63
LMNB1P20700 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.87□□□□□ -1.63
LMNB1P20700 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
LMNB1P20700 RNU6-1074P-201ENST00000383995 104 ntBASIC4.87□□□□□ -1.63
LMNB1P20700 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
LMNB1P20700 AL158156.1-201ENST00000422509 473 ntBASIC4.87□□□□□ -1.63
LMNB1P20700 AL591419.1-201ENST00000427423 339 ntBASIC4.87□□□□□ -1.63
LMNB1P20700 MTCYBP9-201ENST00000431021 303 ntBASIC4.87□□□□□ -1.63
LMNB1P20700 BX510359.1-201ENST00000456973 237 ntBASIC4.87□□□□□ -1.63
LMNB1P20700 SNORD5.1-201ENST00000458800 75 ntBASIC4.87□□□□□ -1.63
LMNB1P20700 RNU7-187P-201ENST00000458985 68 ntBASIC4.87□□□□□ -1.63
LMNB1P20700 AC084198.1-201ENST00000477747 402 ntBASIC4.87□□□□□ -1.63
LMNB1P20700 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.87□□□□□ -1.63
LMNB1P20700 AC096745.1-201ENST00000509945 370 ntBASIC4.87□□□□□ -1.63
LMNB1P20700 SCARNA16.2-201ENST00000516520 172 ntBASIC4.87□□□□□ -1.63
LMNB1P20700 RN7SKP57-201ENST00000517248 293 ntBASIC4.87□□□□□ -1.63
LMNB1P20700 AC007991.1-201ENST00000522680 631 ntBASIC4.87□□□□□ -1.63
LMNB1P20700 SNRPGP16-201ENST00000533275 226 ntBASIC4.87□□□□□ -1.63
LMNB1P20700 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.87□□□□□ -1.63
LMNB1P20700 YPEL5P3-201ENST00000547227 352 ntBASIC4.87□□□□□ -1.63
LMNB1P20700 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.87□□□□□ -1.63
LMNB1P20700 AC006157.1-201ENST00000611750 366 ntBASIC4.87□□□□□ -1.63
LMNB1P20700 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.87□□□□□ -1.63
LMNB1P20700 AC138305.3-201ENST00000624988 240 ntBASIC4.87□□□□□ -1.63
LMNB1P20700 MIR4275-201ENST00000636486 87 ntBASIC4.87□□□□□ -1.63
LMNB1P20700 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.87□□□□□ -1.63
LMNB1P20700 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
LMNB1P20700 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
LMNB1P20700 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LMNB1P20700 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LMNB1P20700 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
LMNB1P20700 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LMNB1P20700 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.86□□□□□ -1.63
LMNB1P20700 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LMNB1P20700 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LMNB1P20700 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.86□□□□□ -1.63
LMNB1P20700 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
LMNB1P20700 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LMNB1P20700 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LMNB1P20700 RNA5SP267-201ENST00000364893 126 ntBASIC4.86□□□□□ -1.63
LMNB1P20700 Y_RNA.364-201ENST00000365532 101 ntBASIC4.86□□□□□ -1.63
LMNB1P20700 AC117470.1-201ENST00000381974 330 ntBASIC4.86□□□□□ -1.63
LMNB1P20700 RNU6-505P-201ENST00000384427 107 ntBASIC4.86□□□□□ -1.63
LMNB1P20700 Z99755.1-201ENST00000414048 380 ntBASIC4.86□□□□□ -1.63
LMNB1P20700 AL139247.1-201ENST00000422768 325 ntBASIC4.86□□□□□ -1.63
LMNB1P20700 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.86□□□□□ -1.63
LMNB1P20700 AL121871.1-201ENST00000443413 436 ntBASIC4.86□□□□□ -1.63
LMNB1P20700 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.86□□□□□ -1.63
LMNB1P20700 RNU6-470P-201ENST00000515954 104 ntBASIC4.86□□□□□ -1.63
LMNB1P20700 RNU6-764P-201ENST00000516396 105 ntBASIC4.86□□□□□ -1.63
LMNB1P20700 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.86□□□□□ -1.63
LMNB1P20700 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.86□□□□□ -1.63
LMNB1P20700 AC010653.1-201ENST00000571108 881 ntBASIC4.86□□□□□ -1.63
LMNB1P20700 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.86□□□□□ -1.63
LMNB1P20700 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.86□□□□□ -1.63
LMNB1P20700 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LMNB1P20700 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LMNB1P20700 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LMNB1P20700 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.86□□□□□ -1.63
LMNB1P20700 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LMNB1P20700 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LMNB1P20700 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.85□□□□□ -1.63
LMNB1P20700 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LMNB1P20700 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
LMNB1P20700 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LMNB1P20700 U1.1-201ENST00000384101 164 ntBASIC4.85□□□□□ -1.63
LMNB1P20700 RNU6-842P-201ENST00000384269 107 ntBASIC4.85□□□□□ -1.63
LMNB1P20700 RNA5SP239-201ENST00000410218 129 ntBASIC4.85□□□□□ -1.63
LMNB1P20700 RNA5SP146-201ENST00000410743 123 ntBASIC4.85□□□□□ -1.63
LMNB1P20700 HMGB3P2-201ENST00000411913 584 ntBASIC4.85□□□□□ -1.63
LMNB1P20700 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.85□□□□□ -1.63
LMNB1P20700 MTCO1P39-201ENST00000426148 480 ntBASIC4.85□□□□□ -1.63
LMNB1P20700 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.85□□□□□ -1.63
LMNB1P20700 SNORA25.10-201ENST00000515926 124 ntBASIC4.85□□□□□ -1.63
LMNB1P20700 RN7SKP18-201ENST00000516005 275 ntBASIC4.85□□□□□ -1.63
LMNB1P20700 SCARNA14-201ENST00000516903 136 ntBASIC4.85□□□□□ -1.63
LMNB1P20700 RNA5SP471-201ENST00000516971 106 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms