Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 Y_RNA.111-201ENST00000363248 100 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 U8.3-201ENST00000363321 132 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 RNU6-188P-201ENST00000364207 107 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 RNY3P10-201ENST00000384764 102 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 HMGN2P35-201ENST00000412164 270 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 ELOCP4-201ENST00000420090 333 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.86□□□□□ -1.95
PDGFRAP16234 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PDGFRAP16234 AL592045.1-201ENST00000429867 352 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.86□□□□□ -1.95
PDGFRAP16234 AC092427.1-202ENST00000430569 476 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 AL033528.1-201ENST00000453780 140 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.86□□□□□ -1.95
PDGFRAP16234 snoU109.1-201ENST00000459339 135 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 RAP1BP2-201ENST00000478270 544 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 RPS15AP34-201ENST00000487776 387 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 AC007182.2-201ENST00000489251 402 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 AC119751.5-201ENST00000514077 770 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 RNA5SP356-201ENST00000515972 94 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 AC090136.1-201ENST00000520009 240 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 HMGB1P41-201ENST00000520234 440 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.86□□□□□ -1.95
PDGFRAP16234 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.86□□□□□ -1.95
PDGFRAP16234 MIR3682-201ENST00000581338 84 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 Z99497.2-201ENST00000603634 310 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 AL355877.2-201ENST00000603670 358 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 ATP1B3P1-201ENST00000605365 821 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 AC069234.5-201ENST00000611056 416 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 AC013562.2-201ENST00000611632 603 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PDGFRAP16234 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PDGFRAP16234 ASNSP3-201ENST00000451989 1306 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PDGFRAP16234 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.86□□□□□ -1.95
PDGFRAP16234 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
PDGFRAP16234 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PDGFRAP16234 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.85□□□□□ -1.95
PDGFRAP16234 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PDGFRAP16234 RNU1-112P-201ENST00000364401 164 ntBASIC2.85□□□□□ -1.95
PDGFRAP16234 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
PDGFRAP16234 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.85□□□□□ -1.95
PDGFRAP16234 Y_RNA.534-201ENST00000384599 112 ntBASIC2.85□□□□□ -1.95
PDGFRAP16234 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
PDGFRAP16234 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
PDGFRAP16234 RPS3AP36-201ENST00000398190 775 ntBASIC2.85□□□□□ -1.95
PDGFRAP16234 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.85□□□□□ -1.95
PDGFRAP16234 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.85□□□□□ -1.95
PDGFRAP16234 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.85□□□□□ -1.95
PDGFRAP16234 AC112220.1-201ENST00000434628 355 ntBASIC2.85□□□□□ -1.95
PDGFRAP16234 ST13P20-201ENST00000447996 1065 ntBASIC2.85□□□□□ -1.95
PDGFRAP16234 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PDGFRAP16234 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.85□□□□□ -1.95
PDGFRAP16234 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.85□□□□□ -1.95
PDGFRAP16234 SNORD42A-201ENST00000459584 64 ntBASIC2.85□□□□□ -1.95
PDGFRAP16234 RPL23AP11-201ENST00000475260 469 ntBASIC2.85□□□□□ -1.95
PDGFRAP16234 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.85□□□□□ -1.95
PDGFRAP16234 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.85□□□□□ -1.95
PDGFRAP16234 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.85□□□□□ -1.95
PDGFRAP16234 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.85□□□□□ -1.95
PDGFRAP16234 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.85□□□□□ -1.95
PDGFRAP16234 AC005771.1-201ENST00000585581 349 ntBASIC2.85□□□□□ -1.95
PDGFRAP16234 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.85□□□□□ -1.95
PDGFRAP16234 AC025811.1-201ENST00000604312 472 ntBASIC2.85□□□□□ -1.95
PDGFRAP16234 AP001506.1-201ENST00000615444 211 ntBASIC2.85□□□□□ -1.95
PDGFRAP16234 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
PDGFRAP16234 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
PDGFRAP16234 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.85□□□□□ -1.95
PDGFRAP16234 NACAP2-201ENST00000318548 624 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 U3.4-201ENST00000363352 213 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
PDGFRAP16234 Y_RNA.510-201ENST00000384511 114 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 RNY3P9-201ENST00000384727 106 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 RNU6-750P-201ENST00000390946 107 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 SNORA40.3-201ENST00000390964 122 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.84□□□□□ -1.95
PDGFRAP16234 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.84□□□□□ -1.95
PDGFRAP16234 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.84□□□□□ -1.95
PDGFRAP16234 AL591704.1-201ENST00000432574 275 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 AL591212.2-201ENST00000433923 257 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 RPS24P1-201ENST00000438550 371 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.84□□□□□ -1.95
PDGFRAP16234 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.84□□□□□ -1.95
PDGFRAP16234 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.84□□□□□ -1.95
PDGFRAP16234 AC093899.1-201ENST00000457984 376 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 AC090525.1-201ENST00000479116 478 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 AC004924.1-201ENST00000480160 781 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 RPL23AP70-201ENST00000483361 460 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 AC139453.3-201ENST00000493276 369 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.84□□□□□ -1.95
PDGFRAP16234 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PDGFRAP16234 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.84□□□□□ -1.95
PDGFRAP16234 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 AC022616.3-201ENST00000523940 148 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 AP003122.3-201ENST00000526316 255 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 AC084851.1-201ENST00000529105 249 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.84□□□□□ -1.95
PDGFRAP16234 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.84□□□□□ -1.95
PDGFRAP16234 MIR4319-201ENST00000577285 85 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms