Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL160004.2-201ENST00000432935 350 ntBASIC4.11□□□□□ -1.75
COL6A2P12110 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.11□□□□□ -1.75
COL6A2P12110 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.11□□□□□ -1.75
COL6A2P12110 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.11□□□□□ -1.75
COL6A2P12110 RPL7P5-201ENST00000471472 736 ntBASIC4.11□□□□□ -1.75
COL6A2P12110 AC011005.2-201ENST00000487324 359 ntBASIC4.11□□□□□ -1.75
COL6A2P12110 AL160314.1-201ENST00000490836 438 ntBASIC4.11□□□□□ -1.75
COL6A2P12110 RN7SL691P-201ENST00000494487 301 ntBASIC4.11□□□□□ -1.75
COL6A2P12110 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.11□□□□□ -1.75
COL6A2P12110 RNU1-86P-201ENST00000516108 154 ntBASIC4.11□□□□□ -1.75
COL6A2P12110 MIR892C-201ENST00000516410 77 ntBASIC4.11□□□□□ -1.75
COL6A2P12110 RNA5SP384-201ENST00000516615 116 ntBASIC4.11□□□□□ -1.75
COL6A2P12110 RNU1-107P-201ENST00000516617 154 ntBASIC4.11□□□□□ -1.75
COL6A2P12110 RNU6-699P-201ENST00000517081 110 ntBASIC4.11□□□□□ -1.75
COL6A2P12110 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.11□□□□□ -1.75
COL6A2P12110 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.11□□□□□ -1.75
COL6A2P12110 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.11□□□□□ -1.75
COL6A2P12110 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.11□□□□□ -1.75
COL6A2P12110 MIR4284-201ENST00000578924 81 ntBASIC4.11□□□□□ -1.75
COL6A2P12110 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.11□□□□□ -1.75
COL6A2P12110 AL591516.1-201ENST00000611326 274 ntBASIC4.11□□□□□ -1.75
COL6A2P12110 AC007485.1-201ENST00000616755 206 ntBASIC4.11□□□□□ -1.75
COL6A2P12110 SNORD39.4-201ENST00000620099 78 ntBASIC4.11□□□□□ -1.75
COL6A2P12110 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.11□□□□□ -1.75
COL6A2P12110 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.11□□□□□ -1.75
COL6A2P12110 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.11□□□□□ -1.75
COL6A2P12110 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.11□□□□□ -1.75
COL6A2P12110 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
COL6A2P12110 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
COL6A2P12110 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
COL6A2P12110 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
COL6A2P12110 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL6A2P12110 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL6A2P12110 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
COL6A2P12110 MAPK10-373ENST00000641983 6772 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.1□□□□□ -1.75
COL6A2P12110 AL158163.1-201ENST00000603915 1649 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL6A2P12110 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
COL6A2P12110 MAPK10-372ENST00000641954 3413 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL6A2P12110 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL6A2P12110 Y_RNA.2-201ENST00000362330 96 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 RNU6-1309P-201ENST00000363305 108 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 Y_RNA.151-201ENST00000363566 112 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 RNU1-32P-201ENST00000363937 159 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 Y_RNA.364-201ENST00000365532 101 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 Y_RNA.496-201ENST00000384444 101 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 RNU6-331P-201ENST00000384724 107 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 MIR517A-201ENST00000385001 87 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 MIR548F4-201ENST00000408515 105 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 RNU6-55P-201ENST00000411092 107 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 SYF2P2-201ENST00000417620 583 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 RPS15AP6-201ENST00000420703 385 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 AC243428.1-201ENST00000421099 264 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 AC068287.1-201ENST00000430283 295 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.1□□□□□ -1.75
COL6A2P12110 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.1□□□□□ -1.75
COL6A2P12110 AC011816.1-201ENST00000441346 546 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.1□□□□□ -1.75
COL6A2P12110 NDUFB1P2-201ENST00000449477 176 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 BTF3P15-201ENST00000455606 336 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 snoU13.4-201ENST00000458916 104 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 RN7SL385P-201ENST00000468873 276 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 AC109327.1-201ENST00000471666 403 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.1□□□□□ -1.75
COL6A2P12110 AC116655.1-201ENST00000508324 901 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 SNORA70.14-201ENST00000516205 110 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 RNA5SP49-201ENST00000516450 115 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 SCARNA16.2-201ENST00000516520 172 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 RN7SKP92-201ENST00000517266 244 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL6A2P12110 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.1□□□□□ -1.75
COL6A2P12110 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.1□□□□□ -1.75
COL6A2P12110 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.1□□□□□ -1.75
COL6A2P12110 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.1□□□□□ -1.75
COL6A2P12110 MIR4644-201ENST00000579929 84 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 BNIP3P16-201ENST00000589779 534 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.1□□□□□ -1.75
COL6A2P12110 AP002826.1-201ENST00000608835 315 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 AC090132.2-201ENST00000615881 347 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.1□□□□□ -1.75
COL6A2P12110 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL6A2P12110 AC066616.2-201ENST00000559334 1481 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 AC106871.1-201ENST00000568324 3102 ntBASIC4.1□□□□□ -1.75
COL6A2P12110 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.1□□□□□ -1.75
COL6A2P12110 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL6A2P12110 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL6A2P12110 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.09□□□□□ -1.75
COL6A2P12110 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL6A2P12110 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL6A2P12110 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL6A2P12110 Y_RNA.428-201ENST00000384078 102 ntBASIC4.09□□□□□ -1.75
COL6A2P12110 RNU1-89P-201ENST00000384592 164 ntBASIC4.09□□□□□ -1.75
COL6A2P12110 AC011933.1-201ENST00000413334 321 ntBASIC4.09□□□□□ -1.75
COL6A2P12110 AL096701.2-201ENST00000416920 238 ntBASIC4.09□□□□□ -1.75
COL6A2P12110 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.09□□□□□ -1.75
COL6A2P12110 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.09□□□□□ -1.75
COL6A2P12110 FTH1P25-201ENST00000447665 469 ntBASIC4.09□□□□□ -1.75
COL6A2P12110 PCMTD1P1-201ENST00000455560 355 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms