Protein–RNA interactions for Protein: P08138

NGFR, Tumor necrosis factor receptor superfamily member 16, humanhuman

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFRP08138 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.2□□□□□ -1.9
NGFRP08138 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.2□□□□□ -1.9
NGFRP08138 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NGFRP08138 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NGFRP08138 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.2□□□□□ -1.9
NGFRP08138 TNPO1P3-201ENST00000436471 2662 ntBASIC3.2□□□□□ -1.9
NGFRP08138 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.2□□□□□ -1.9
NGFRP08138 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NGFRP08138 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.19□□□□□ -1.9
NGFRP08138 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.19□□□□□ -1.9
NGFRP08138 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NGFRP08138 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NGFRP08138 RNU6-1287P-201ENST00000362914 107 ntBASIC3.19□□□□□ -1.9
NGFRP08138 RNU6-82P-201ENST00000363970 107 ntBASIC3.19□□□□□ -1.9
NGFRP08138 RNU6-946P-201ENST00000383878 107 ntBASIC3.19□□□□□ -1.9
NGFRP08138 RNU6-1013P-201ENST00000384180 107 ntBASIC3.19□□□□□ -1.9
NGFRP08138 RNU6-1160P-201ENST00000384546 104 ntBASIC3.19□□□□□ -1.9
NGFRP08138 RNU6-1127P-201ENST00000384580 107 ntBASIC3.19□□□□□ -1.9
NGFRP08138 RNU6-1060P-201ENST00000384664 107 ntBASIC3.19□□□□□ -1.9
NGFRP08138 MIR135A2-201ENST00000384854 100 ntBASIC3.19□□□□□ -1.9
NGFRP08138 RNU4-46P-201ENST00000410818 138 ntBASIC3.19□□□□□ -1.9
NGFRP08138 POLHP1-201ENST00000411806 470 ntBASIC3.19□□□□□ -1.9
NGFRP08138 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.19□□□□□ -1.9
NGFRP08138 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.19□□□□□ -1.9
NGFRP08138 AP000907.1-201ENST00000428428 510 ntBASIC3.19□□□□□ -1.9
NGFRP08138 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.19□□□□□ -1.9
NGFRP08138 AC005019.1-201ENST00000436455 431 ntBASIC3.19□□□□□ -1.9
NGFRP08138 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.19□□□□□ -1.9
NGFRP08138 RPS15AP27-201ENST00000449183 343 ntBASIC3.19□□□□□ -1.9
NGFRP08138 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.19□□□□□ -1.9
NGFRP08138 AC008481.1-201ENST00000463278 396 ntBASIC3.19□□□□□ -1.9
NGFRP08138 AC010631.1-201ENST00000474150 156 ntBASIC3.19□□□□□ -1.9
NGFRP08138 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.19□□□□□ -1.9
NGFRP08138 RPL7P23-201ENST00000493874 747 ntBASIC3.19□□□□□ -1.9
NGFRP08138 RPL7P47-201ENST00000497299 556 ntBASIC3.19□□□□□ -1.9
NGFRP08138 TRBVA-201ENST00000498804 316 ntBASIC3.19□□□□□ -1.9
NGFRP08138 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.19□□□□□ -1.9
NGFRP08138 RNU6-566P-201ENST00000516790 107 ntBASIC3.19□□□□□ -1.9
NGFRP08138 RNU6-685P-201ENST00000517088 95 ntBASIC3.19□□□□□ -1.9
NGFRP08138 AC023632.4-201ENST00000517783 191 ntBASIC3.19□□□□□ -1.9
NGFRP08138 NDUFB9P3-201ENST00000521269 501 ntBASIC3.19□□□□□ -1.9
NGFRP08138 AP000763.2-201ENST00000540641 163 ntBASIC3.19□□□□□ -1.9
NGFRP08138 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.19□□□□□ -1.9
NGFRP08138 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.19□□□□□ -1.9
NGFRP08138 AC067852.3-201ENST00000589177 561 ntBASIC3.19□□□□□ -1.9
NGFRP08138 AL355812.1-201ENST00000603215 216 ntBASIC3.19□□□□□ -1.9
NGFRP08138 AC006254.3-201ENST00000603353 884 ntBASIC3.19□□□□□ -1.9
NGFRP08138 AC092747.3-201ENST00000603769 301 ntBASIC3.19□□□□□ -1.9
NGFRP08138 AL031176.1-201ENST00000604554 466 ntBASIC3.19□□□□□ -1.9
NGFRP08138 AC080078.3-201ENST00000605407 463 ntBASIC3.19□□□□□ -1.9
NGFRP08138 AL355802.3-201ENST00000607571 545 ntBASIC3.19□□□□□ -1.9
NGFRP08138 SNHG22-203ENST00000617833 660 ntBASIC3.19□□□□□ -1.9
NGFRP08138 U4.6-201ENST00000621618 127 ntBASIC3.19□□□□□ -1.9
NGFRP08138 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.19□□□□□ -1.9
NGFRP08138 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NGFRP08138 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NGFRP08138 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.19□□□□□ -1.9
NGFRP08138 PRO1804-201ENST00000623780 2050 ntBASIC3.19□□□□□ -1.9
NGFRP08138 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
NGFRP08138 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NGFRP08138 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NGFRP08138 AC032011.1-201ENST00000611703 1549 ntBASIC3.19□□□□□ -1.9
NGFRP08138 AC103710.2-202ENST00000641454 2853 ntBASIC3.18□□□□□ -1.9
NGFRP08138 AP001148.1-201ENST00000624124 2359 ntBASIC3.18□□□□□ -1.9
NGFRP08138 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.18□□□□□ -1.9
NGFRP08138 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NGFRP08138 Y_RNA.31-201ENST00000362574 102 ntBASIC3.18□□□□□ -1.9
NGFRP08138 RNU6-254P-201ENST00000363377 107 ntBASIC3.18□□□□□ -1.9
NGFRP08138 SNORD113-7-201ENST00000363762 77 ntBASIC3.18□□□□□ -1.9
NGFRP08138 SNORA73.2-201ENST00000364946 201 ntBASIC3.18□□□□□ -1.9
NGFRP08138 SNORA33.2-201ENST00000365413 134 ntBASIC3.18□□□□□ -1.9
NGFRP08138 Y_RNA.395-201ENST00000383945 109 ntBASIC3.18□□□□□ -1.9
NGFRP08138 RNU4-65P-201ENST00000410473 140 ntBASIC3.18□□□□□ -1.9
NGFRP08138 RNU4-78P-201ENST00000410940 126 ntBASIC3.18□□□□□ -1.9
NGFRP08138 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.18□□□□□ -1.9
NGFRP08138 TOMM22P1-201ENST00000418578 312 ntBASIC3.18□□□□□ -1.9
NGFRP08138 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.18□□□□□ -1.9
NGFRP08138 RAC1P6-201ENST00000423911 575 ntBASIC3.18□□□□□ -1.9
NGFRP08138 SKA2P1-201ENST00000425592 390 ntBASIC3.18□□□□□ -1.9
NGFRP08138 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.18□□□□□ -1.9
NGFRP08138 MTCO3P45-201ENST00000443036 613 ntBASIC3.18□□□□□ -1.9
NGFRP08138 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.18□□□□□ -1.9
NGFRP08138 RPS4XP2-201ENST00000458402 793 ntBASIC3.18□□□□□ -1.9
NGFRP08138 SCARNA18-201ENST00000459004 134 ntBASIC3.18□□□□□ -1.9
NGFRP08138 RPL23AP67-201ENST00000465341 474 ntBASIC3.18□□□□□ -1.9
NGFRP08138 AC021205.2-201ENST00000480069 347 ntBASIC3.18□□□□□ -1.9
NGFRP08138 AL163540.1-201ENST00000485382 386 ntBASIC3.18□□□□□ -1.9
NGFRP08138 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.18□□□□□ -1.9
NGFRP08138 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.18□□□□□ -1.9
NGFRP08138 RNU6-256P-201ENST00000516747 97 ntBASIC3.18□□□□□ -1.9
NGFRP08138 IGKV2D-19-201ENST00000523346 262 ntBASIC3.18□□□□□ -1.9
NGFRP08138 AP004371.1-201ENST00000525240 214 ntBASIC3.18□□□□□ -1.9
NGFRP08138 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.18□□□□□ -1.9
NGFRP08138 AP003385.6-201ENST00000531603 374 ntBASIC3.18□□□□□ -1.9
NGFRP08138 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.18□□□□□ -1.9
NGFRP08138 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.18□□□□□ -1.9
NGFRP08138 RPL23AP84-201ENST00000571193 464 ntBASIC3.18□□□□□ -1.9
NGFRP08138 AC007151.1-201ENST00000572774 483 ntBASIC3.18□□□□□ -1.9
NGFRP08138 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.18□□□□□ -1.9
NGFRP08138 MIR3690-201ENST00000580266 75 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms