Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 RPS27AP10-201ENST00000496103 208 ntBASIC0.78□□□□□ -2.28
SIX6O95475 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
SIX6O95475 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.78□□□□□ -2.28
SIX6O95475 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.78□□□□□ -2.28
SIX6O95475 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.78□□□□□ -2.28
SIX6O95475 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC0.78□□□□□ -2.28
SIX6O95475 AC019288.1-201ENST00000557918 224 ntBASIC0.78□□□□□ -2.28
SIX6O95475 MIR4422-201ENST00000581938 83 ntBASIC0.78□□□□□ -2.28
SIX6O95475 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.78□□□□□ -2.28
SIX6O95475 MIR3199-2-201ENST00000636243 86 ntBASIC0.78□□□□□ -2.28
SIX6O95475 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
SIX6O95475 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.78□□□□□ -2.29
SIX6O95475 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.77□□□□□ -2.29
SIX6O95475 SNORA51.6-201ENST00000384151 125 ntBASIC0.77□□□□□ -2.29
SIX6O95475 RNA5SP465-201ENST00000391195 109 ntBASIC0.77□□□□□ -2.29
SIX6O95475 AL121978.1-201ENST00000402778 359 ntBASIC0.77□□□□□ -2.29
SIX6O95475 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.77□□□□□ -2.29
SIX6O95475 ZYG11AP1-201ENST00000430329 837 ntBASIC0.77□□□□□ -2.29
SIX6O95475 USP9YP24-201ENST00000434374 697 ntBASIC0.77□□□□□ -2.29
SIX6O95475 USP9YP35-201ENST00000435696 412 ntBASIC0.77□□□□□ -2.29
SIX6O95475 HMGB3P12-201ENST00000438745 556 ntBASIC0.77□□□□□ -2.29
SIX6O95475 CR769776.1-201ENST00000441254 787 ntBASIC0.77□□□□□ -2.29
SIX6O95475 MTCO1P53-201ENST00000441633 699 ntBASIC0.77□□□□□ -2.29
SIX6O95475 AL161788.1-201ENST00000441805 169 ntBASIC0.77□□□□□ -2.29
SIX6O95475 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.77□□□□□ -2.29
SIX6O95475 AL137159.1-201ENST00000452808 512 ntBASIC0.77□□□□□ -2.29
SIX6O95475 AC244505.3-201ENST00000454598 187 ntBASIC0.77□□□□□ -2.29
SIX6O95475 AC005908.1-201ENST00000468701 347 ntBASIC0.77□□□□□ -2.29
SIX6O95475 AC132942.1-201ENST00000486753 483 ntBASIC0.77□□□□□ -2.29
SIX6O95475 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.77□□□□□ -2.29
SIX6O95475 AC093677.1-201ENST00000514414 678 ntBASIC0.77□□□□□ -2.29
SIX6O95475 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.77□□□□□ -2.29
SIX6O95475 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SIX6O95475 AC135279.1-201ENST00000543493 504 ntBASIC0.77□□□□□ -2.29
SIX6O95475 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.77□□□□□ -2.29
SIX6O95475 RPL21P5-201ENST00000554662 472 ntBASIC0.77□□□□□ -2.29
SIX6O95475 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC0.77□□□□□ -2.29
SIX6O95475 AC005261.5-201ENST00000596280 355 ntBASIC0.77□□□□□ -2.29
SIX6O95475 VN1R88P-201ENST00000596787 292 ntBASIC0.77□□□□□ -2.29
SIX6O95475 GAS5-AS1-201ENST00000602767 694 ntBASIC0.77□□□□□ -2.29
SIX6O95475 AC136601.2-201ENST00000604356 474 ntBASIC0.77□□□□□ -2.29
SIX6O95475 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC0.77□□□□□ -2.29
SIX6O95475 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.77□□□□□ -2.29
SIX6O95475 uc_338.12-201ENST00000616344 181 ntBASIC0.77□□□□□ -2.29
SIX6O95475 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.77□□□□□ -2.29
SIX6O95475 AC083865.1-201ENST00000636634 831 ntBASIC0.77□□□□□ -2.29
SIX6O95475 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.77□□□□□ -2.29
SIX6O95475 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.77□□□□□ -2.29
SIX6O95475 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.76□□□□□ -2.29
SIX6O95475 MTCO1P23-201ENST00000415223 1526 ntBASIC0.76□□□□□ -2.29
SIX6O95475 TEX21P-201ENST00000447107 1476 ntBASIC0.76□□□□□ -2.29
SIX6O95475 MIR518D-201ENST00000385014 87 ntBASIC0.76□□□□□ -2.29
SIX6O95475 MIR561-201ENST00000385216 97 ntBASIC0.76□□□□□ -2.29
SIX6O95475 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
SIX6O95475 RPL37P10-201ENST00000412884 288 ntBASIC0.76□□□□□ -2.29
SIX6O95475 AL121882.1-201ENST00000422893 417 ntBASIC0.76□□□□□ -2.29
SIX6O95475 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.76□□□□□ -2.29
SIX6O95475 RPL31P54-201ENST00000429803 370 ntBASIC0.76□□□□□ -2.29
SIX6O95475 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.76□□□□□ -2.29
SIX6O95475 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.76□□□□□ -2.29
SIX6O95475 AC018868.1-201ENST00000491307 315 ntBASIC0.76□□□□□ -2.29
SIX6O95475 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.76□□□□□ -2.29
SIX6O95475 AC117522.2-201ENST00000510049 657 ntBASIC0.76□□□□□ -2.29
SIX6O95475 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.76□□□□□ -2.29
SIX6O95475 SNORD19.2-201ENST00000516978 73 ntBASIC0.76□□□□□ -2.29
SIX6O95475 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC0.76□□□□□ -2.29
SIX6O95475 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
SIX6O95475 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.76□□□□□ -2.29
SIX6O95475 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.76□□□□□ -2.29
SIX6O95475 CYB5AP5-201ENST00000549779 389 ntBASIC0.76□□□□□ -2.29
SIX6O95475 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.76□□□□□ -2.29
SIX6O95475 AC004067.1-201ENST00000608733 700 ntBASIC0.76□□□□□ -2.29
SIX6O95475 AC119674.1-220ENST00000641502 1048 ntBASIC0.76□□□□□ -2.29
SIX6O95475 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
SIX6O95475 SNORD115-3-201ENST00000363100 82 ntBASIC0.75□□□□□ -2.29
SIX6O95475 RNU2-33P-201ENST00000410344 192 ntBASIC0.75□□□□□ -2.29
SIX6O95475 TOMM20P4-201ENST00000427861 435 ntBASIC0.75□□□□□ -2.29
SIX6O95475 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.75□□□□□ -2.29
SIX6O95475 AL691517.1-201ENST00000440833 1235 ntBASIC0.75□□□□□ -2.29
SIX6O95475 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.75□□□□□ -2.29
SIX6O95475 AP001324.2-201ENST00000461163 319 ntBASIC0.75□□□□□ -2.29
SIX6O95475 RPL22P13-201ENST00000493291 347 ntBASIC0.75□□□□□ -2.29
SIX6O95475 COX7A2P2-201ENST00000505291 250 ntBASIC0.75□□□□□ -2.29
SIX6O95475 AC103851.1-201ENST00000506833 274 ntBASIC0.75□□□□□ -2.29
SIX6O95475 SNORA48.11-201ENST00000517015 89 ntBASIC0.75□□□□□ -2.29
SIX6O95475 AC104997.1-201ENST00000519761 717 ntBASIC0.75□□□□□ -2.29
SIX6O95475 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
SIX6O95475 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.75□□□□□ -2.29
SIX6O95475 NDUFA5P6-201ENST00000542110 379 ntBASIC0.75□□□□□ -2.29
SIX6O95475 AL132857.1-201ENST00000555180 708 ntBASIC0.75□□□□□ -2.29
SIX6O95475 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.75□□□□□ -2.29
SIX6O95475 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.75□□□□□ -2.29
SIX6O95475 AC116312.1-201ENST00000606841 314 ntBASIC0.75□□□□□ -2.29
SIX6O95475 U1.36-201ENST00000620684 176 ntBASIC0.75□□□□□ -2.29
SIX6O95475 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.75□□□□□ -2.29
SIX6O95475 SNORA25.8-201ENST00000364831 128 ntBASIC0.74□□□□□ -2.29
SIX6O95475 Y_RNA.500-201ENST00000384466 111 ntBASIC0.74□□□□□ -2.29
SIX6O95475 RNU6-1222P-201ENST00000384615 107 ntBASIC0.74□□□□□ -2.29
SIX6O95475 MIR95-201ENST00000385072 81 ntBASIC0.74□□□□□ -2.29
SIX6O95475 RNU2-36P-201ENST00000410361 191 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms