Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.13□□□□□ -2.07
NPHP4O75161 AC090615.1-201ENST00000577519 154 ntBASIC2.13□□□□□ -2.07
NPHP4O75161 AL136363.1-201ENST00000605349 337 ntBASIC2.13□□□□□ -2.07
NPHP4O75161 AC104985.3-201ENST00000623479 597 ntBASIC2.13□□□□□ -2.07
NPHP4O75161 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.13□□□□□ -2.07
NPHP4O75161 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.13□□□□□ -2.07
NPHP4O75161 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
NPHP4O75161 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NPHP4O75161 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.12□□□□□ -2.07
NPHP4O75161 AL049641.1-201ENST00000441055 1948 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 AL356473.1-201ENST00000406203 1408 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 Y_RNA.234-201ENST00000364409 97 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 RNU6-1122P-201ENST00000384449 107 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 U3.20-201ENST00000390909 217 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 SRIP3-201ENST00000413200 219 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 TPMTP2-201ENST00000414372 726 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.12□□□□□ -2.07
NPHP4O75161 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.12□□□□□ -2.07
NPHP4O75161 MTCO2P5-201ENST00000422621 426 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 HMGN2P19-201ENST00000425149 265 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 AC008850.1-201ENST00000427546 362 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 AL354695.1-201ENST00000427935 228 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 MTND2P20-201ENST00000440805 661 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.12□□□□□ -2.07
NPHP4O75161 RPL18AP17-201ENST00000455326 198 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.12□□□□□ -2.07
NPHP4O75161 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.12□□□□□ -2.07
NPHP4O75161 RNU7-136P-201ENST00000458819 69 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 RNA5SP364-201ENST00000516938 78 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.12□□□□□ -2.07
NPHP4O75161 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.12□□□□□ -2.07
NPHP4O75161 AC124947.2-202ENST00000552735 133 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 HMGB1P14-201ENST00000557424 591 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.12□□□□□ -2.07
NPHP4O75161 OR1M4P-201ENST00000589199 287 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 AL022067.1-201ENST00000602426 454 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 AC011451.2-201ENST00000604303 598 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 AC069545.1-201ENST00000605671 358 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.12□□□□□ -2.07
NPHP4O75161 AC103710.4-201ENST00000609301 899 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 AC024257.5-201ENST00000612739 531 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 AC023158.2-201ENST00000614876 543 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 MIR6130-201ENST00000619419 109 ntBASIC2.12□□□□□ -2.07
NPHP4O75161 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.12□□□□□ -2.07
NPHP4O75161 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
NPHP4O75161 AL596028.1-201ENST00000326971 197 ntBASIC2.11□□□□□ -2.07
NPHP4O75161 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
NPHP4O75161 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NPHP4O75161 MIR767-201ENST00000390228 109 ntBASIC2.11□□□□□ -2.07
NPHP4O75161 SNORA40.4-201ENST00000390971 128 ntBASIC2.11□□□□□ -2.07
NPHP4O75161 RNU6-193P-201ENST00000410977 107 ntBASIC2.11□□□□□ -2.07
NPHP4O75161 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.11□□□□□ -2.07
NPHP4O75161 AL356867.1-201ENST00000429623 299 ntBASIC2.11□□□□□ -2.07
NPHP4O75161 GTF2IP20-201ENST00000431663 360 ntBASIC2.11□□□□□ -2.07
NPHP4O75161 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.11□□□□□ -2.07
NPHP4O75161 MTND4LP16-201ENST00000440828 295 ntBASIC2.11□□□□□ -2.07
NPHP4O75161 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NPHP4O75161 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.11□□□□□ -2.07
NPHP4O75161 RPS15AP34-201ENST00000487776 387 ntBASIC2.11□□□□□ -2.07
NPHP4O75161 AC114981.1-201ENST00000503897 678 ntBASIC2.11□□□□□ -2.07
NPHP4O75161 SUMO2P6-201ENST00000505273 288 ntBASIC2.11□□□□□ -2.07
NPHP4O75161 AC022447.3-201ENST00000506865 495 ntBASIC2.11□□□□□ -2.07
NPHP4O75161 SNORA19.3-201ENST00000516165 130 ntBASIC2.11□□□□□ -2.07
NPHP4O75161 SCARNA15.2-201ENST00000516409 127 ntBASIC2.11□□□□□ -2.07
NPHP4O75161 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.11□□□□□ -2.07
NPHP4O75161 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.11□□□□□ -2.07
NPHP4O75161 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.11□□□□□ -2.07
NPHP4O75161 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.11□□□□□ -2.07
NPHP4O75161 GLYCAM1-201ENST00000546596 285 ntBASIC2.11□□□□□ -2.07
NPHP4O75161 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.11□□□□□ -2.07
NPHP4O75161 AL132657.2-201ENST00000564417 358 ntBASIC2.11□□□□□ -2.07
NPHP4O75161 MTND4LP25-201ENST00000570218 163 ntBASIC2.11□□□□□ -2.07
NPHP4O75161 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NPHP4O75161 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.11□□□□□ -2.07
NPHP4O75161 MTND4LP5-201ENST00000605152 292 ntBASIC2.11□□□□□ -2.07
NPHP4O75161 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.11□□□□□ -2.07
NPHP4O75161 AC002550.2-201ENST00000621246 394 ntBASIC2.11□□□□□ -2.07
NPHP4O75161 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
NPHP4O75161 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NPHP4O75161 AC007785.2-201ENST00000598627 1916 ntBASIC2.11□□□□□ -2.07
NPHP4O75161 AC135776.4-201ENST00000624300 1904 ntBASIC2.11□□□□□ -2.07
NPHP4O75161 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.11□□□□□ -2.07
NPHP4O75161 AL449283.1-202ENST00000418249 604 ntBASIC2.1□□□□□ -2.07
NPHP4O75161 AC007919.1-201ENST00000429380 217 ntBASIC2.1□□□□□ -2.07
NPHP4O75161 RNF2P1-201ENST00000442955 1010 ntBASIC2.1□□□□□ -2.07
NPHP4O75161 BMI1P1-201ENST00000445879 941 ntBASIC2.1□□□□□ -2.07
NPHP4O75161 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NPHP4O75161 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.1□□□□□ -2.07
NPHP4O75161 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.1□□□□□ -2.07
NPHP4O75161 RNU6-1282P-201ENST00000516735 96 ntBASIC2.1□□□□□ -2.07
NPHP4O75161 RNU6-714P-201ENST00000516963 103 ntBASIC2.1□□□□□ -2.07
NPHP4O75161 RNA5SP471-201ENST00000516971 106 ntBASIC2.1□□□□□ -2.07
NPHP4O75161 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.1□□□□□ -2.07
NPHP4O75161 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.1□□□□□ -2.07
NPHP4O75161 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.1□□□□□ -2.07
NPHP4O75161 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.1□□□□□ -2.07
NPHP4O75161 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.1□□□□□ -2.07
NPHP4O75161 MTND3P13-201ENST00000574391 343 ntBASIC2.1□□□□□ -2.07
NPHP4O75161 HMGN2P15-201ENST00000585707 270 ntBASIC2.1□□□□□ -2.07
NPHP4O75161 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms