Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 HSPA8P4-201ENST00000511877 1920 ntBASIC4.15□□□□□ -1.74
TRIM13O60858 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.15□□□□□ -1.74
TRIM13O60858 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.15□□□□□ -1.74
TRIM13O60858 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.15□□□□□ -1.74
TRIM13O60858 AC018555.1-201ENST00000567548 1980 ntBASIC4.15□□□□□ -1.74
TRIM13O60858 Y_RNA.48-201ENST00000362710 103 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 Y_RNA.170-201ENST00000363746 110 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 RNU6-682P-201ENST00000363843 106 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 RNU6-1329P-201ENST00000365664 107 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 RNY1P5-201ENST00000383890 115 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 MIR215-201ENST00000384858 110 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 RN7SKP159-201ENST00000410657 292 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 RNA5SP111-201ENST00000411386 101 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 AL391219.1-201ENST00000422570 483 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 EIF4EP2-201ENST00000422816 654 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM13O60858 AL591704.1-201ENST00000432574 275 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 DAP3P1-201ENST00000441522 278 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM13O60858 AL590399.6-201ENST00000446396 307 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.15□□□□□ -1.75
TRIM13O60858 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.15□□□□□ -1.75
TRIM13O60858 RNU7-138P-201ENST00000459479 64 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 HMGB1P25-201ENST00000468402 607 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 RPL21P126-201ENST00000470049 478 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 RPS23P5-201ENST00000495419 428 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM13O60858 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM13O60858 AC008716.1-201ENST00000511084 513 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM13O60858 Y_RNA.687-201ENST00000516558 91 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM13O60858 DEFB108E-201ENST00000524692 240 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 AP006587.4-201ENST00000526053 529 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 AC087441.2-201ENST00000529141 262 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 AP002392.1-201ENST00000537692 208 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM13O60858 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM13O60858 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM13O60858 U73479.1-201ENST00000618062 168 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 AL589994.2-201ENST00000621124 579 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 AC018445.2-201ENST00000622987 260 ntBASIC4.15□□□□□ -1.75
TRIM13O60858 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM13O60858 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.15□□□□□ -1.75
TRIM13O60858 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM13O60858 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM13O60858 RAD17P1-201ENST00000418130 2042 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM13O60858 RNU6-1266P-201ENST00000362794 105 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 snoU2_19.2-201ENST00000363024 80 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 Y_RNA.122-201ENST00000363331 96 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 SNORD50.2-201ENST00000365465 70 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 RNU6-81P-201ENST00000365608 104 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 RNA5SP332-201ENST00000391063 115 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 RNU11-4P-201ENST00000391149 133 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 RNU6-516P-201ENST00000411381 104 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM13O60858 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM13O60858 RPL23AP33-201ENST00000442301 452 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 FABP5P13-201ENST00000452144 328 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 AC018437.1-201ENST00000492214 406 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 AC067942.3-201ENST00000512025 362 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 RNA5SP73-201ENST00000516744 108 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 IGKV2-38-201ENST00000517443 247 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 IGKV2-23-201ENST00000518729 323 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM13O60858 CR383656.7-201ENST00000548164 174 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 HNRNPCP4-201ENST00000571636 900 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 OR7E18P-201ENST00000592589 702 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 AC113403.1-201ENST00000604910 193 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 MIR1244-1-201ENST00000612829 85 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM13O60858 AC021753.1-201ENST00000635724 168 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 MIR1244-3-201ENST00000635744 85 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 MIR1244-2-201ENST00000636449 85 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 MIR1244-4-202ENST00000636813 85 ntBASIC4.14□□□□□ -1.75
TRIM13O60858 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM13O60858 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM13O60858 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM13O60858 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM13O60858 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM13O60858 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM13O60858 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM13O60858 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
TRIM13O60858 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.13□□□□□ -1.75
TRIM13O60858 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.13□□□□□ -1.75
TRIM13O60858 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM13O60858 MIR411-201ENST00000362239 96 ntBASIC4.13□□□□□ -1.75
TRIM13O60858 SNORD81.1-201ENST00000363064 77 ntBASIC4.13□□□□□ -1.75
TRIM13O60858 RN7SKP269-201ENST00000365545 319 ntBASIC4.13□□□□□ -1.75
TRIM13O60858 MIR153-1-201ENST00000384914 90 ntBASIC4.13□□□□□ -1.75
TRIM13O60858 CYB5AP4-201ENST00000396692 399 ntBASIC4.13□□□□□ -1.75
TRIM13O60858 AL139039.1-201ENST00000401900 692 ntBASIC4.13□□□□□ -1.75
TRIM13O60858 MRPL35P1-201ENST00000404272 572 ntBASIC4.13□□□□□ -1.75
TRIM13O60858 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM13O60858 AL157831.1-201ENST00000426134 473 ntBASIC4.13□□□□□ -1.75
TRIM13O60858 AC010655.1-201ENST00000449336 292 ntBASIC4.13□□□□□ -1.75
TRIM13O60858 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms