Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC118273.2-201ENST00000532092 465 ntBASIC2.94□□□□□ -1.94
PRKNO60260 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.94□□□□□ -1.94
PRKNO60260 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.94□□□□□ -1.94
PRKNO60260 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.94□□□□□ -1.94
PRKNO60260 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.94□□□□□ -1.94
PRKNO60260 AP005205.1-201ENST00000563503 508 ntBASIC2.94□□□□□ -1.94
PRKNO60260 MIR4703-201ENST00000577728 79 ntBASIC2.94□□□□□ -1.94
PRKNO60260 AC060780.3-201ENST00000589464 80 ntBASIC2.94□□□□□ -1.94
PRKNO60260 AP002826.1-201ENST00000608835 315 ntBASIC2.94□□□□□ -1.94
PRKNO60260 DISC2.1-201ENST00000612827 205 ntBASIC2.94□□□□□ -1.94
PRKNO60260 U6.42-201ENST00000618440 107 ntBASIC2.94□□□□□ -1.94
PRKNO60260 AC009033.1-201ENST00000624279 431 ntBASIC2.94□□□□□ -1.94
PRKNO60260 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PRKNO60260 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.94□□□□□ -1.94
PRKNO60260 ASNSP3-201ENST00000451989 1306 ntBASIC2.93□□□□□ -1.94
PRKNO60260 AL354685.2-201ENST00000448218 1447 ntBASIC2.93□□□□□ -1.94
PRKNO60260 RIOK3P1-201ENST00000418778 1528 ntBASIC2.93□□□□□ -1.94
PRKNO60260 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PRKNO60260 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
PRKNO60260 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PRKNO60260 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.93□□□□□ -1.94
PRKNO60260 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
PRKNO60260 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PRKNO60260 AC005183.1-201ENST00000603687 1979 ntBASIC2.93□□□□□ -1.94
PRKNO60260 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.93□□□□□ -1.94
PRKNO60260 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
PRKNO60260 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
PRKNO60260 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
PRKNO60260 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.93□□□□□ -1.94
PRKNO60260 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
PRKNO60260 RNU6-552P-201ENST00000362869 119 ntBASIC2.93□□□□□ -1.94
PRKNO60260 RNU6-190P-201ENST00000384154 102 ntBASIC2.93□□□□□ -1.94
PRKNO60260 MIR591-201ENST00000385290 95 ntBASIC2.93□□□□□ -1.94
PRKNO60260 SNORD67-201ENST00000390833 111 ntBASIC2.93□□□□□ -1.94
PRKNO60260 SNORA48.2-201ENST00000390926 124 ntBASIC2.93□□□□□ -1.94
PRKNO60260 RNU6-903P-201ENST00000391270 109 ntBASIC2.93□□□□□ -1.94
PRKNO60260 FGF7P8-201ENST00000402994 292 ntBASIC2.93□□□□□ -1.94
PRKNO60260 AC092809.3-201ENST00000415453 231 ntBASIC2.93□□□□□ -1.94
PRKNO60260 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.93□□□□□ -1.94
PRKNO60260 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.93□□□□□ -1.94
PRKNO60260 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.93□□□□□ -1.94
PRKNO60260 CYCSP32-201ENST00000440548 321 ntBASIC2.93□□□□□ -1.94
PRKNO60260 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.93□□□□□ -1.94
PRKNO60260 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.93□□□□□ -1.94
PRKNO60260 RPS4XP22-201ENST00000480755 780 ntBASIC2.93□□□□□ -1.94
PRKNO60260 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.93□□□□□ -1.94
PRKNO60260 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.93□□□□□ -1.94
PRKNO60260 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.93□□□□□ -1.94
PRKNO60260 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.93□□□□□ -1.94
PRKNO60260 AC025465.4-201ENST00000513422 638 ntBASIC2.93□□□□□ -1.94
PRKNO60260 RNU1-61P-201ENST00000516107 151 ntBASIC2.93□□□□□ -1.94
PRKNO60260 RNU6-123P-201ENST00000516163 102 ntBASIC2.93□□□□□ -1.94
PRKNO60260 RNU1-143P-201ENST00000516296 146 ntBASIC2.93□□□□□ -1.94
PRKNO60260 SNORA70.16-201ENST00000516390 95 ntBASIC2.93□□□□□ -1.94
PRKNO60260 RNU6-1256P-201ENST00000516539 103 ntBASIC2.93□□□□□ -1.94
PRKNO60260 Y_RNA.689-201ENST00000516589 107 ntBASIC2.93□□□□□ -1.94
PRKNO60260 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.93□□□□□ -1.94
PRKNO60260 AP005435.4-201ENST00000529514 284 ntBASIC2.93□□□□□ -1.94
PRKNO60260 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.93□□□□□ -1.94
PRKNO60260 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.93□□□□□ -1.94
PRKNO60260 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.93□□□□□ -1.94
PRKNO60260 AL121579.1-201ENST00000555129 305 ntBASIC2.93□□□□□ -1.94
PRKNO60260 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.93□□□□□ -1.94
PRKNO60260 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.93□□□□□ -1.94
PRKNO60260 MIR3921-201ENST00000577308 85 ntBASIC2.93□□□□□ -1.94
PRKNO60260 AC010525.2-201ENST00000590920 195 ntBASIC2.93□□□□□ -1.94
PRKNO60260 AC002545.1-201ENST00000592511 181 ntBASIC2.93□□□□□ -1.94
PRKNO60260 AC104763.2-201ENST00000604179 382 ntBASIC2.93□□□□□ -1.94
PRKNO60260 AL035413.2-201ENST00000604801 525 ntBASIC2.93□□□□□ -1.94
PRKNO60260 AC106900.2-201ENST00000604994 317 ntBASIC2.93□□□□□ -1.94
PRKNO60260 U1.23-201ENST00000610293 146 ntBASIC2.93□□□□□ -1.94
PRKNO60260 AL365204.3-201ENST00000612448 685 ntBASIC2.93□□□□□ -1.94
PRKNO60260 AC012409.4-201ENST00000612923 249 ntBASIC2.93□□□□□ -1.94
PRKNO60260 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
PRKNO60260 RNU1-68P-201ENST00000615382 146 ntBASIC2.93□□□□□ -1.94
PRKNO60260 U1.39-201ENST00000621562 146 ntBASIC2.93□□□□□ -1.94
PRKNO60260 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.93□□□□□ -1.94
PRKNO60260 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.93□□□□□ -1.94
PRKNO60260 SDAD1P2-201ENST00000441308 2028 ntBASIC2.93□□□□□ -1.94
PRKNO60260 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PRKNO60260 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.93□□□□□ -1.94
PRKNO60260 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PRKNO60260 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PRKNO60260 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
PRKNO60260 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.92□□□□□ -1.94
PRKNO60260 RNU6-867P-201ENST00000364956 107 ntBASIC2.92□□□□□ -1.94
PRKNO60260 MIR128-1-201ENST00000384921 82 ntBASIC2.92□□□□□ -1.94
PRKNO60260 MT-TL1-201ENST00000386347 75 ntBASIC2.92□□□□□ -1.94
PRKNO60260 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
PRKNO60260 AL513331.1-201ENST00000411908 397 ntBASIC2.92□□□□□ -1.94
PRKNO60260 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.92□□□□□ -1.94
PRKNO60260 BTF3L4P3-201ENST00000418879 476 ntBASIC2.92□□□□□ -1.94
PRKNO60260 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.92□□□□□ -1.94
PRKNO60260 RPL27AP8-201ENST00000424277 446 ntBASIC2.92□□□□□ -1.94
PRKNO60260 AC091390.3-201ENST00000426478 338 ntBASIC2.92□□□□□ -1.94
PRKNO60260 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.92□□□□□ -1.94
PRKNO60260 HMGB1P27-201ENST00000431429 603 ntBASIC2.92□□□□□ -1.94
PRKNO60260 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.92□□□□□ -1.94
PRKNO60260 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.92□□□□□ -1.94
PRKNO60260 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms