Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.92□□□□□ -1.94
SSX4O60224 EIF1P4-201ENST00000572664 335 ntBASIC2.92□□□□□ -1.94
SSX4O60224 MTND4LP5-201ENST00000605152 292 ntBASIC2.92□□□□□ -1.94
SSX4O60224 DUSP12P1-201ENST00000612874 516 ntBASIC2.92□□□□□ -1.94
SSX4O60224 MIR7112-201ENST00000616126 65 ntBASIC2.92□□□□□ -1.94
SSX4O60224 AC073534.2-201ENST00000620377 381 ntBASIC2.92□□□□□ -1.94
SSX4O60224 AC011155.2-201ENST00000623202 216 ntBASIC2.92□□□□□ -1.94
SSX4O60224 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.92□□□□□ -1.94
SSX4O60224 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SSX4O60224 SEPT14P19-203ENST00000633205 211 ntBASIC2.92□□□□□ -1.94
SSX4O60224 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.92□□□□□ -1.94
SSX4O60224 U6.114-201ENST00000636407 96 ntBASIC2.92□□□□□ -1.94
SSX4O60224 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
SSX4O60224 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SSX4O60224 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SSX4O60224 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SSX4O60224 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.91□□□□□ -1.94
SSX4O60224 RNU6-606P-201ENST00000384721 111 ntBASIC2.91□□□□□ -1.94
SSX4O60224 UBE2V1P2-201ENST00000397758 440 ntBASIC2.91□□□□□ -1.94
SSX4O60224 MIR888-201ENST00000401186 77 ntBASIC2.91□□□□□ -1.94
SSX4O60224 RPS4XP8-201ENST00000402039 771 ntBASIC2.91□□□□□ -1.94
SSX4O60224 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.91□□□□□ -1.94
SSX4O60224 RNU6-387P-201ENST00000411331 105 ntBASIC2.91□□□□□ -1.94
SSX4O60224 OR51A5P-201ENST00000415429 942 ntBASIC2.91□□□□□ -1.94
SSX4O60224 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.91□□□□□ -1.94
SSX4O60224 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.91□□□□□ -1.94
SSX4O60224 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SSX4O60224 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.91□□□□□ -1.94
SSX4O60224 AC008264.1-201ENST00000447612 367 ntBASIC2.91□□□□□ -1.94
SSX4O60224 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.91□□□□□ -1.94
SSX4O60224 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.91□□□□□ -1.94
SSX4O60224 AL162395.1-201ENST00000457882 422 ntBASIC2.91□□□□□ -1.94
SSX4O60224 RPS29P15-201ENST00000458329 171 ntBASIC2.91□□□□□ -1.94
SSX4O60224 RPS29P20-201ENST00000489592 171 ntBASIC2.91□□□□□ -1.94
SSX4O60224 AC104806.1-201ENST00000508720 308 ntBASIC2.91□□□□□ -1.94
SSX4O60224 AC098591.2-201ENST00000510152 315 ntBASIC2.91□□□□□ -1.94
SSX4O60224 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.91□□□□□ -1.94
SSX4O60224 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.91□□□□□ -1.94
SSX4O60224 SNORA31.26-201ENST00000517250 137 ntBASIC2.91□□□□□ -1.94
SSX4O60224 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.91□□□□□ -1.94
SSX4O60224 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.91□□□□□ -1.94
SSX4O60224 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.91□□□□□ -1.94
SSX4O60224 AP003122.3-201ENST00000526316 255 ntBASIC2.91□□□□□ -1.94
SSX4O60224 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SSX4O60224 AC084851.1-201ENST00000529105 249 ntBASIC2.91□□□□□ -1.94
SSX4O60224 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.91□□□□□ -1.94
SSX4O60224 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.91□□□□□ -1.94
SSX4O60224 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.91□□□□□ -1.94
SSX4O60224 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.91□□□□□ -1.94
SSX4O60224 MIR5680-201ENST00000577577 84 ntBASIC2.91□□□□□ -1.94
SSX4O60224 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SSX4O60224 MIR4276-201ENST00000584832 70 ntBASIC2.91□□□□□ -1.94
SSX4O60224 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.91□□□□□ -1.94
SSX4O60224 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.91□□□□□ -1.94
SSX4O60224 AC006557.5-201ENST00000603126 811 ntBASIC2.91□□□□□ -1.94
SSX4O60224 AC012507.3-201ENST00000603556 477 ntBASIC2.91□□□□□ -1.94
SSX4O60224 AL162713.1-201ENST00000604480 262 ntBASIC2.91□□□□□ -1.94
SSX4O60224 AL670379.4-201ENST00000605279 254 ntBASIC2.91□□□□□ -1.94
SSX4O60224 AL161629.2-201ENST00000615347 275 ntBASIC2.91□□□□□ -1.94
SSX4O60224 SNORD39.4-201ENST00000620099 78 ntBASIC2.91□□□□□ -1.94
SSX4O60224 AC098679.4-201ENST00000624241 654 ntBASIC2.91□□□□□ -1.94
SSX4O60224 AL359740.1-201ENST00000624340 592 ntBASIC2.91□□□□□ -1.94
SSX4O60224 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.91□□□□□ -1.94
SSX4O60224 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SSX4O60224 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SSX4O60224 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SSX4O60224 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SSX4O60224 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SSX4O60224 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.9□□□□□ -1.94
SSX4O60224 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.9□□□□□ -1.95
SSX4O60224 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.9□□□□□ -1.95
SSX4O60224 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
SSX4O60224 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
SSX4O60224 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
SSX4O60224 Y_RNA.409-201ENST00000383990 98 ntBASIC2.9□□□□□ -1.95
SSX4O60224 MIR181B1-201ENST00000385240 110 ntBASIC2.9□□□□□ -1.95
SSX4O60224 MIR301A-201ENST00000385261 86 ntBASIC2.9□□□□□ -1.95
SSX4O60224 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SSX4O60224 MTCO3P40-201ENST00000392516 676 ntBASIC2.9□□□□□ -1.95
SSX4O60224 SNORA11.2-201ENST00000408318 127 ntBASIC2.9□□□□□ -1.95
SSX4O60224 AC245054.2-201ENST00000415639 319 ntBASIC2.9□□□□□ -1.95
SSX4O60224 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.9□□□□□ -1.95
SSX4O60224 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.9□□□□□ -1.95
SSX4O60224 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.9□□□□□ -1.95
SSX4O60224 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.9□□□□□ -1.95
SSX4O60224 DPPA3P1-201ENST00000448050 469 ntBASIC2.9□□□□□ -1.95
SSX4O60224 UQCRHP3-201ENST00000451503 251 ntBASIC2.9□□□□□ -1.95
SSX4O60224 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.9□□□□□ -1.95
SSX4O60224 RPL23AP67-201ENST00000465341 474 ntBASIC2.9□□□□□ -1.95
SSX4O60224 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.9□□□□□ -1.95
SSX4O60224 AC126182.1-201ENST00000478134 357 ntBASIC2.9□□□□□ -1.95
SSX4O60224 RNA5SP76-201ENST00000516277 87 ntBASIC2.9□□□□□ -1.95
SSX4O60224 RNU6-685P-201ENST00000517088 95 ntBASIC2.9□□□□□ -1.95
SSX4O60224 RNU6-1315P-201ENST00000517187 99 ntBASIC2.9□□□□□ -1.95
SSX4O60224 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.9□□□□□ -1.95
SSX4O60224 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.9□□□□□ -1.95
SSX4O60224 RANP3-201ENST00000530970 276 ntBASIC2.9□□□□□ -1.95
SSX4O60224 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.9□□□□□ -1.95
SSX4O60224 H3F3AP1-201ENST00000559984 334 ntBASIC2.9□□□□□ -1.95
SSX4O60224 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms