Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 AC098831.1-201ENST00000440661 216 ntBASIC3.56□□□□□ -1.84
NPHP1O15259 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.56□□□□□ -1.84
NPHP1O15259 RPS15AP27-201ENST00000449183 343 ntBASIC3.56□□□□□ -1.84
NPHP1O15259 AC126182.1-201ENST00000478134 357 ntBASIC3.56□□□□□ -1.84
NPHP1O15259 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.56□□□□□ -1.84
NPHP1O15259 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.56□□□□□ -1.84
NPHP1O15259 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.56□□□□□ -1.84
NPHP1O15259 AC008413.1-201ENST00000511864 177 ntBASIC3.56□□□□□ -1.84
NPHP1O15259 MRPS36P2-201ENST00000512569 299 ntBASIC3.56□□□□□ -1.84
NPHP1O15259 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.56□□□□□ -1.84
NPHP1O15259 AP003122.3-201ENST00000526316 255 ntBASIC3.56□□□□□ -1.84
NPHP1O15259 AC084851.1-201ENST00000529105 249 ntBASIC3.56□□□□□ -1.84
NPHP1O15259 AC091544.4-201ENST00000555268 342 ntBASIC3.56□□□□□ -1.84
NPHP1O15259 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.56□□□□□ -1.84
NPHP1O15259 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.56□□□□□ -1.84
NPHP1O15259 AL355598.1-201ENST00000604169 202 ntBASIC3.56□□□□□ -1.84
NPHP1O15259 AC013562.2-201ENST00000611632 603 ntBASIC3.56□□□□□ -1.84
NPHP1O15259 AC130324.3-201ENST00000614165 542 ntBASIC3.56□□□□□ -1.84
NPHP1O15259 AP001506.1-201ENST00000615444 211 ntBASIC3.56□□□□□ -1.84
NPHP1O15259 PISRT1-201ENST00000626175 531 ntBASIC3.56□□□□□ -1.84
NPHP1O15259 Z99571.1-201ENST00000636677 394 ntBASIC3.56□□□□□ -1.84
NPHP1O15259 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.56□□□□□ -1.84
NPHP1O15259 AC138915.1-201ENST00000565427 1685 ntBASIC3.55□□□□□ -1.84
NPHP1O15259 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NPHP1O15259 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NPHP1O15259 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPHP1O15259 AL360182.1-201ENST00000397433 468 ntBASIC3.55□□□□□ -1.84
NPHP1O15259 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.55□□□□□ -1.84
NPHP1O15259 SDCBPP3-201ENST00000419629 891 ntBASIC3.55□□□□□ -1.84
NPHP1O15259 AL358075.3-201ENST00000426289 226 ntBASIC3.55□□□□□ -1.84
NPHP1O15259 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.55□□□□□ -1.84
NPHP1O15259 AC009961.2-201ENST00000435771 251 ntBASIC3.55□□□□□ -1.84
NPHP1O15259 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.55□□□□□ -1.84
NPHP1O15259 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.55□□□□□ -1.84
NPHP1O15259 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.55□□□□□ -1.84
NPHP1O15259 MTATP6P7-201ENST00000453315 681 ntBASIC3.55□□□□□ -1.84
NPHP1O15259 AC093899.1-201ENST00000457984 376 ntBASIC3.55□□□□□ -1.84
NPHP1O15259 RN7SL633P-201ENST00000488974 297 ntBASIC3.55□□□□□ -1.84
NPHP1O15259 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.55□□□□□ -1.84
NPHP1O15259 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.55□□□□□ -1.84
NPHP1O15259 RNU6-143P-201ENST00000516942 93 ntBASIC3.55□□□□□ -1.84
NPHP1O15259 RNU6-56P-201ENST00000516986 93 ntBASIC3.55□□□□□ -1.84
NPHP1O15259 RNU6-1220P-201ENST00000517126 108 ntBASIC3.55□□□□□ -1.84
NPHP1O15259 NACAP3-201ENST00000552100 481 ntBASIC3.55□□□□□ -1.84
NPHP1O15259 AC234778.2-201ENST00000566241 354 ntBASIC3.55□□□□□ -1.84
NPHP1O15259 MIR3167-201ENST00000579623 85 ntBASIC3.55□□□□□ -1.84
NPHP1O15259 MIR3682-201ENST00000581338 84 ntBASIC3.55□□□□□ -1.84
NPHP1O15259 AC073114.1-201ENST00000612027 490 ntBASIC3.55□□□□□ -1.84
NPHP1O15259 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.55□□□□□ -1.84
NPHP1O15259 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NPHP1O15259 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.55□□□□□ -1.84
NPHP1O15259 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPHP1O15259 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.55□□□□□ -1.84
NPHP1O15259 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.55□□□□□ -1.84
NPHP1O15259 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NPHP1O15259 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NPHP1O15259 SNORA20.2-201ENST00000383922 131 ntBASIC3.54□□□□□ -1.84
NPHP1O15259 RNU6-190P-201ENST00000384154 102 ntBASIC3.54□□□□□ -1.84
NPHP1O15259 AL138827.1-201ENST00000402666 306 ntBASIC3.54□□□□□ -1.84
NPHP1O15259 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.54□□□□□ -1.84
NPHP1O15259 RNU6-248P-201ENST00000410720 107 ntBASIC3.54□□□□□ -1.84
NPHP1O15259 AC127391.1-201ENST00000411737 98 ntBASIC3.54□□□□□ -1.84
NPHP1O15259 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.54□□□□□ -1.84
NPHP1O15259 AL353729.1-201ENST00000425044 720 ntBASIC3.54□□□□□ -1.84
NPHP1O15259 AC104332.2-201ENST00000429959 156 ntBASIC3.54□□□□□ -1.84
NPHP1O15259 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.54□□□□□ -1.84
NPHP1O15259 GAPDHP17-201ENST00000449858 1001 ntBASIC3.54□□□□□ -1.84
NPHP1O15259 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.54□□□□□ -1.84
NPHP1O15259 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.54□□□□□ -1.84
NPHP1O15259 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.54□□□□□ -1.84
NPHP1O15259 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.54□□□□□ -1.84
NPHP1O15259 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.54□□□□□ -1.84
NPHP1O15259 OR5B19P-201ENST00000531766 928 ntBASIC3.54□□□□□ -1.84
NPHP1O15259 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.54□□□□□ -1.84
NPHP1O15259 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.54□□□□□ -1.84
NPHP1O15259 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.54□□□□□ -1.84
NPHP1O15259 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.54□□□□□ -1.84
NPHP1O15259 AL133173.2-201ENST00000614270 90 ntBASIC3.54□□□□□ -1.84
NPHP1O15259 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NPHP1O15259 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.54□□□□□ -1.84
NPHP1O15259 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.54□□□□□ -1.84
NPHP1O15259 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NPHP1O15259 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.53□□□□□ -1.84
NPHP1O15259 AC008264.2-201ENST00000610193 3731 ntBASIC3.53□□□□□ -1.84
NPHP1O15259 NACAP2-201ENST00000318548 624 ntBASIC3.53□□□□□ -1.84
NPHP1O15259 MIR558-201ENST00000384920 94 ntBASIC3.53□□□□□ -1.84
NPHP1O15259 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.53□□□□□ -1.84
NPHP1O15259 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.53□□□□□ -1.84
NPHP1O15259 MED13P1-201ENST00000428342 171 ntBASIC3.53□□□□□ -1.84
NPHP1O15259 AL591704.1-201ENST00000432574 275 ntBASIC3.53□□□□□ -1.84
NPHP1O15259 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.53□□□□□ -1.84
NPHP1O15259 AC009296.1-201ENST00000443146 155 ntBASIC3.53□□□□□ -1.84
NPHP1O15259 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.53□□□□□ -1.84
NPHP1O15259 MTND2P4-201ENST00000445034 1004 ntBASIC3.53□□□□□ -1.84
NPHP1O15259 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NPHP1O15259 AP000936.2-201ENST00000447151 681 ntBASIC3.53□□□□□ -1.84
NPHP1O15259 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.53□□□□□ -1.84
NPHP1O15259 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.53□□□□□ -1.84
NPHP1O15259 AC026801.1-201ENST00000497178 464 ntBASIC3.53□□□□□ -1.84
NPHP1O15259 AC105252.1-201ENST00000503089 286 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms