Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SOX1O00570 SAMMSON-213ENST00000641336 1521 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SOX1O00570 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SOX1O00570 AL391684.1-202ENST00000641293 1636 ntBASIC4.72□□□□□ -1.65
SOX1O00570 AC009812.4-201ENST00000569134 1805 ntBASIC4.72□□□□□ -1.65
SOX1O00570 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.72□□□□□ -1.65
SOX1O00570 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SOX1O00570 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SOX1O00570 AC007685.1-201ENST00000329806 452 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNU6-37P-201ENST00000362692 107 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNY1-201ENST00000364228 113 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNU6-11P-201ENST00000364234 107 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNU6-512P-201ENST00000364438 103 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNA5SP72-201ENST00000364442 117 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNU6-7-201ENST00000364784 107 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNU6-8-201ENST00000365467 107 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNU6-25P-201ENST00000383873 107 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNU6-1-201ENST00000383898 107 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNU6-48P-201ENST00000384161 107 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNU6-36P-201ENST00000384172 107 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNU6-4P-201ENST00000384205 107 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNU6-708P-201ENST00000384217 107 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNU6-5P-201ENST00000384238 107 ntBASIC4.72□□□□□ -1.65
SOX1O00570 Y_RNA.458-201ENST00000384240 102 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNU6-3P-201ENST00000384314 107 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNU6-16P-201ENST00000384385 107 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNU6-15P-201ENST00000384534 107 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNU6-2-201ENST00000384627 107 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNU6-29P-201ENST00000384637 107 ntBASIC4.72□□□□□ -1.65
SOX1O00570 SNORA19-201ENST00000384737 128 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNU6-9-201ENST00000384776 107 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNA5SP494-201ENST00000410653 129 ntBASIC4.72□□□□□ -1.65
SOX1O00570 SDAD1P3-201ENST00000427380 333 ntBASIC4.72□□□□□ -1.65
SOX1O00570 HMGN2P31-201ENST00000432430 273 ntBASIC4.72□□□□□ -1.65
SOX1O00570 HSPE1P6-201ENST00000479457 291 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNU4-71P-201ENST00000516258 113 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNA5SP519-201ENST00000516480 119 ntBASIC4.72□□□□□ -1.65
SOX1O00570 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.72□□□□□ -1.65
SOX1O00570 PRPF19P1-201ENST00000584766 898 ntBASIC4.72□□□□□ -1.65
SOX1O00570 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.72□□□□□ -1.65
SOX1O00570 AC006557.5-201ENST00000603126 811 ntBASIC4.72□□□□□ -1.65
SOX1O00570 RNU6-6P-201ENST00000606623 107 ntBASIC4.72□□□□□ -1.65
SOX1O00570 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SOX1O00570 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.72□□□□□ -1.65
SOX1O00570 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.72□□□□□ -1.65
SOX1O00570 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SOX1O00570 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SOX1O00570 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SOX1O00570 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.72□□□□□ -1.65
SOX1O00570 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.71□□□□□ -1.65
SOX1O00570 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.71□□□□□ -1.65
SOX1O00570 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
SOX1O00570 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
SOX1O00570 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.71□□□□□ -1.66
SOX1O00570 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SOX1O00570 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.71□□□□□ -1.66
SOX1O00570 Y_RNA.150-201ENST00000363562 102 ntBASIC4.71□□□□□ -1.66
SOX1O00570 U3.13-201ENST00000364804 214 ntBASIC4.71□□□□□ -1.66
SOX1O00570 MIR153-1-201ENST00000384914 90 ntBASIC4.71□□□□□ -1.66
SOX1O00570 MTCYBP2-201ENST00000407745 171 ntBASIC4.71□□□□□ -1.66
SOX1O00570 RNA5SP36-201ENST00000410197 133 ntBASIC4.71□□□□□ -1.66
SOX1O00570 RNU2-33P-201ENST00000410344 192 ntBASIC4.71□□□□□ -1.66
SOX1O00570 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SOX1O00570 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.71□□□□□ -1.66
SOX1O00570 AL138785.1-201ENST00000425821 331 ntBASIC4.71□□□□□ -1.66
SOX1O00570 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.71□□□□□ -1.66
SOX1O00570 AC067942.3-201ENST00000512025 362 ntBASIC4.71□□□□□ -1.66
SOX1O00570 Y_RNA.713-201ENST00000517013 96 ntBASIC4.71□□□□□ -1.66
SOX1O00570 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.71□□□□□ -1.66
SOX1O00570 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.71□□□□□ -1.66
SOX1O00570 AC009314.1-201ENST00000603871 304 ntBASIC4.71□□□□□ -1.66
SOX1O00570 AC006077.1-201ENST00000604746 343 ntBASIC4.71□□□□□ -1.66
SOX1O00570 MIR6891-201ENST00000618788 93 ntBASIC4.71□□□□□ -1.66
SOX1O00570 AL353748.2-201ENST00000622148 471 ntBASIC4.71□□□□□ -1.66
SOX1O00570 AL354798.1-201ENST00000622505 329 ntBASIC4.71□□□□□ -1.66
SOX1O00570 MIR6500-201ENST00000622700 86 ntBASIC4.71□□□□□ -1.66
SOX1O00570 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.71□□□□□ -1.66
SOX1O00570 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SOX1O00570 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SOX1O00570 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
SOX1O00570 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.71□□□□□ -1.66
SOX1O00570 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
SOX1O00570 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SOX1O00570 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.71□□□□□ -1.66
SOX1O00570 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.71□□□□□ -1.66
SOX1O00570 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
SOX1O00570 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.71□□□□□ -1.66
SOX1O00570 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.7□□□□□ -1.66
SOX1O00570 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SOX1O00570 SDAD1P2-201ENST00000441308 2028 ntBASIC4.7□□□□□ -1.66
SOX1O00570 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SOX1O00570 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SOX1O00570 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.7□□□□□ -1.66
SOX1O00570 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.7□□□□□ -1.66
SOX1O00570 Y_RNA.65-201ENST00000362846 100 ntBASIC4.7□□□□□ -1.66
SOX1O00570 Y_RNA.297-201ENST00000364950 91 ntBASIC4.7□□□□□ -1.66
SOX1O00570 RNU6-746P-201ENST00000384112 109 ntBASIC4.7□□□□□ -1.66
SOX1O00570 RNA5SP187-201ENST00000384400 119 ntBASIC4.7□□□□□ -1.66
SOX1O00570 MIR215-201ENST00000384858 110 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms