Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AC003989.2-201ENST00000440224 169 ntBASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 USP9YP15-201ENST00000442391 422 ntBASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 RPL32P28-201ENST00000443577 397 ntBASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 MRPL42P4-201ENST00000453267 443 ntBASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 RNU1-98P-201ENST00000458992 160 ntBASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 AC114981.1-201ENST00000503897 678 ntBASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 AP005435.4-201ENST00000529514 284 ntBASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 AC022254.1-201ENST00000567857 235 ntBASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 AC012213.3-201ENST00000577199 777 ntBASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 MIR3198-2-201ENST00000577868 80 ntBASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 ZNF92P2-201ENST00000600543 1059 ntBASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 AC103810.8-201ENST00000607347 118 ntBASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 AC093673.2-201ENST00000609674 331 ntBASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 AC092192.1-201ENST00000633154 1018 ntBASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
TRAV4A0A0B4J268 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 RNU5E-1-201ENST00000362477 120 ntBASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 USP9YP6-201ENST00000413550 854 ntBASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 RPL23AP39-201ENST00000415533 405 ntBASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 AL645568.3-201ENST00000433683 316 ntBASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 AL137159.1-201ENST00000452808 512 ntBASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 KATNBL1P6-201ENST00000453433 915 ntBASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 RPS29P11-201ENST00000496507 171 ntBASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 RNU6-927P-201ENST00000516199 100 ntBASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 NDUFA5P6-201ENST00000542110 379 ntBASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 UBE2L4-201ENST00000587688 464 ntBASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 SNRPGP17-201ENST00000603780 214 ntBASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 AC100814.1-201ENST00000606963 623 ntBASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 AC003001.2-201ENST00000616294 831 ntBASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 AC008121.3-201ENST00000618726 433 ntBASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 AC084768.2-201ENST00000622736 221 ntBASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
TRAV4A0A0B4J268 RNU6-658P-201ENST00000384606 106 ntBASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 EIF4EP2-201ENST00000422816 654 ntBASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 DEFB130D-201ENST00000426866 237 ntBASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 MTCYBP15-201ENST00000433123 1127 ntBASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 AL353706.1-201ENST00000436728 494 ntBASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 RPL7P54-201ENST00000438336 674 ntBASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 AL360221.1-201ENST00000445989 335 ntBASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 RNA5SP57-201ENST00000459463 123 ntBASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 AC104564.1-201ENST00000493028 407 ntBASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 RNU6-1102P-201ENST00000516149 96 ntBASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 RNU6-714P-201ENST00000516963 103 ntBASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 SNORA44.1-201ENST00000517031 108 ntBASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 CYB5AP5-201ENST00000549779 389 ntBASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 AC104581.2-201ENST00000572227 430 ntBASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 AC124283.4-201ENST00000581815 456 ntBASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 AC090330.1-201ENST00000588646 764 ntBASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 AL118508.4-201ENST00000624142 1176 ntBASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV4A0A0B4J268 RNU6-223P-201ENST00000362830 107 ntBASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 SNORD48-201ENST00000364953 64 ntBASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 Z98749.2-208ENST00000381646 500 ntBASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 SNORA40.18-201ENST00000391200 128 ntBASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 AL590084.2-201ENST00000401481 382 ntBASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 AC078974.1-201ENST00000411597 223 ntBASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 MTND1P21-201ENST00000412991 285 ntBASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 AL353621.1-201ENST00000418219 243 ntBASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 AC010153.1-201ENST00000432862 727 ntBASIC1.21□□□□□ -2.22
TRAV4A0A0B4J268 AL512661.1-201ENST00000434586 1253 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms