Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 RNA5SP112-201ENST00000515937 99 ntBASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU6-970P-201ENST00000516312 107 ntBASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU6-703P-201ENST00000516946 107 ntBASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU6-548P-201ENST00000517083 115 ntBASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 RNU6-840P-201ENST00000517275 65 ntBASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 AC026616.1-201ENST00000523157 525 ntBASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 AP005639.2-201ENST00000527592 928 ntBASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 AC006199.1-201ENST00000548728 219 ntBASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 HIGD1AP17-201ENST00000554576 276 ntBASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 MIR4255-201ENST00000579351 72 ntBASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 AL139344.1-201ENST00000605228 195 ntBASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 AC243773.3-201ENST00000613270 256 ntBASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
TRAV1-1A0A0B4J248 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 RNU1-72P-201ENST00000362976 153 ntBASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 RNU6-609P-201ENST00000365459 107 ntBASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 MIR95-201ENST00000385072 81 ntBASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 AL590084.2-201ENST00000401481 382 ntBASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 RN7SKP51-201ENST00000410781 304 ntBASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 NANOGP2-201ENST00000435391 727 ntBASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 MTND1P28-201ENST00000435623 950 ntBASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 PTGES3P1-201ENST00000439531 483 ntBASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 AC244505.3-201ENST00000454598 187 ntBASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 snoU13.8-201ENST00000458890 104 ntBASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 MTCYBP35-201ENST00000503630 1137 ntBASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 RNA5SP290-201ENST00000517133 127 ntBASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 MTCO2P15-201ENST00000532655 656 ntBASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 ARL2BPP2-201ENST00000550907 489 ntBASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 AL353997.4-201ENST00000586196 166 ntBASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 AC098826.3-201ENST00000603823 466 ntBASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 AC026741.1-201ENST00000605892 482 ntBASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 AL773524.1-201ENST00000614065 229 ntBASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 AC009268.2-201ENST00000621925 457 ntBASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 AC093875.1-201ENST00000623688 504 ntBASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 AC019226.1-201ENST00000625666 515 ntBASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
TRAV1-1A0A0B4J248 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 AC107982.1-201ENST00000507171 1300 ntBASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 RNU5B-1-201ENST00000363286 116 ntBASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 TXNP7-201ENST00000406296 293 ntBASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 RNA5SP450-201ENST00000411206 102 ntBASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 MTCYBP38-201ENST00000417160 1123 ntBASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 AL158823.1-201ENST00000418441 478 ntBASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 HSPE1P21-201ENST00000438283 308 ntBASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 AL161651.1-201ENST00000440882 223 ntBASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 ARPC3P5-201ENST00000448802 534 ntBASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 AC008481.1-201ENST00000463278 396 ntBASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 RNU6-927P-201ENST00000516199 100 ntBASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 Y_RNA.675-201ENST00000516389 149 ntBASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 AC107953.1-201ENST00000522216 297 ntBASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 MTCYBP23-201ENST00000558717 1102 ntBASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 ROCK1P1-201ENST00000573767 549 ntBASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 MIR3126-201ENST00000577443 74 ntBASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 MIR4524B-201ENST00000581569 115 ntBASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 AF129408.1-201ENST00000608767 431 ntBASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 AC008759.3-201ENST00000613300 508 ntBASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 AC011939.3-201ENST00000613686 466 ntBASIC1.2□□□□□ -2.22
TRAV1-1A0A0B4J248 TUG1_2.1-201ENST00000614234 87 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms