Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC021739.1-201ENST00000559631 174 ntBASIC1.23□□□□□ -2.21
TRAV3A0A0B4J244 AC233702.2-202ENST00000562547 291 ntBASIC1.23□□□□□ -2.21
TRAV3A0A0B4J244 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.23□□□□□ -2.21
TRAV3A0A0B4J244 MIR4765-201ENST00000585007 77 ntBASIC1.23□□□□□ -2.21
TRAV3A0A0B4J244 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAV3A0A0B4J244 AL078605.1-201ENST00000603529 500 ntBASIC1.23□□□□□ -2.21
TRAV3A0A0B4J244 AC069304.2-201ENST00000605154 435 ntBASIC1.23□□□□□ -2.21
TRAV3A0A0B4J244 AC007038.2-201ENST00000608095 740 ntBASIC1.23□□□□□ -2.21
TRAV3A0A0B4J244 AC107075.1-201ENST00000613695 314 ntBASIC1.23□□□□□ -2.21
TRAV3A0A0B4J244 AL773524.1-201ENST00000614065 229 ntBASIC1.23□□□□□ -2.21
TRAV3A0A0B4J244 MIR8084-201ENST00000614105 89 ntBASIC1.23□□□□□ -2.21
TRAV3A0A0B4J244 AC091834.1-201ENST00000614543 472 ntBASIC1.23□□□□□ -2.21
TRAV3A0A0B4J244 AL357080.1-201ENST00000617394 239 ntBASIC1.23□□□□□ -2.21
TRAV3A0A0B4J244 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV3A0A0B4J244 MIR3199-2-201ENST00000636243 86 ntBASIC1.23□□□□□ -2.21
TRAV3A0A0B4J244 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
TRAV3A0A0B4J244 MTCO1P4-201ENST00000520516 1409 ntBASIC1.23□□□□□ -2.21
TRAV3A0A0B4J244 MTND5P10-201ENST00000603719 1809 ntBASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 RNU6-28P-201ENST00000362378 107 ntBASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 U6.112-201ENST00000384129 70 ntBASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 AL445669.1-201ENST00000426743 755 ntBASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 MTND1P28-201ENST00000435623 950 ntBASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 MTND2P20-201ENST00000440805 661 ntBASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 AC096745.1-201ENST00000509945 370 ntBASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 RNU6-703P-201ENST00000516946 107 ntBASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 AP001189.2-201ENST00000527320 189 ntBASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 AP005639.2-201ENST00000527592 928 ntBASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 AP005435.4-201ENST00000529514 284 ntBASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 AC138915.2-201ENST00000569776 97 ntBASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 MIR4255-201ENST00000579351 72 ntBASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 AP001542.1-201ENST00000591314 200 ntBASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 BX248123.2-201ENST00000606318 124 ntBASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 AC106052.1-201ENST00000608029 497 ntBASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 AL445264.1-201ENST00000621719 171 ntBASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 AC007490.1-201ENST00000624321 703 ntBASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 AC079416.3-201ENST00000624479 549 ntBASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
TRAV3A0A0B4J244 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 RNA5SP432-201ENST00000362480 116 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 RNU1-39P-201ENST00000383897 165 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 MTND1P21-201ENST00000412991 285 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 TPMTP2-201ENST00000414372 726 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 NANOGP2-201ENST00000435391 727 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 HSPE1P21-201ENST00000438283 308 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 AL158053.1-201ENST00000441503 453 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 TPRKBP1-201ENST00000456243 481 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 AMD1P1-201ENST00000457220 922 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 AC104685.1-201ENST00000502445 371 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 RNA5SP458-201ENST00000516188 119 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 RNU6-927P-201ENST00000516199 100 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 AP003497.1-201ENST00000528472 562 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 AC006199.1-201ENST00000548728 219 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 AC044913.1-201ENST00000557200 430 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 LINC00933-203ENST00000559812 219 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 LINC00557-201ENST00000563184 1279 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 AC022254.1-201ENST00000567857 235 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 ROCK1P1-201ENST00000573767 549 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 MIR3126-201ENST00000577443 74 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 AC002545.1-201ENST00000592511 181 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 AP001542.2-201ENST00000593141 364 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 AC004805.2-201ENST00000605382 482 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 AC010133.1-201ENST00000615809 842 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 AC108479.2-201ENST00000617314 601 ntBASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
TRAV3A0A0B4J244 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 RNU6-343P-201ENST00000364709 104 ntBASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 AL590084.2-201ENST00000401481 382 ntBASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms