Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
CCDC187A0A096LP49 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 RNA5SP267-201ENST00000364893 126 ntBASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 AL162578.1-201ENST00000406202 378 ntBASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 AP000567.1-201ENST00000406413 156 ntBASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 RHEBP3-201ENST00000411920 351 ntBASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 AL158156.1-201ENST00000422509 473 ntBASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 NDUFB4P7-201ENST00000423198 363 ntBASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 RPL7P46-201ENST00000425129 740 ntBASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 RPL35AP12-201ENST00000425362 338 ntBASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 RPL7P12-201ENST00000446719 750 ntBASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 SNRPFP3-201ENST00000457792 225 ntBASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 SNORD19B-201ENST00000459623 84 ntBASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 RN7SL601P-201ENST00000471221 293 ntBASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 RPL23AP11-201ENST00000475260 469 ntBASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 RBBP4P6-201ENST00000508098 202 ntBASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 SNORA70.16-201ENST00000516390 95 ntBASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 AC006504.6-201ENST00000590142 199 ntBASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 AC136443.5-201ENST00000603741 370 ntBASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 AC124303.1-201ENST00000605703 360 ntBASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 SNORA62.6-201ENST00000606322 83 ntBASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 AL110115.1-201ENST00000614396 364 ntBASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 AL359547.2-201ENST00000615810 418 ntBASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 AC090617.10-201ENST00000624308 134 ntBASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 AC119674.1-207ENST00000641355 633 ntBASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CCDC187A0A096LP49 TPTE2P4-201ENST00000258589 1605 ntBASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 Y_RNA.128-201ENST00000363391 112 ntBASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 Y_RNA.133-201ENST00000363428 110 ntBASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 Y_RNA.145-201ENST00000363527 102 ntBASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 SNORA4.3-201ENST00000365564 137 ntBASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 AL606923.1-201ENST00000406616 190 ntBASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 Z92545.1-201ENST00000411782 234 ntBASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 MTND3P8-201ENST00000412909 339 ntBASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 RPL30P2-201ENST00000414021 291 ntBASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 YPEL5P1-201ENST00000419731 367 ntBASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 CYCSP4-201ENST00000429682 331 ntBASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 BRK1P2-201ENST00000442875 223 ntBASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 AC087588.1-201ENST00000462203 316 ntBASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 RPL21P8-201ENST00000465083 535 ntBASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 AC091885.1-201ENST00000506658 268 ntBASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 RNU6-123P-201ENST00000516163 102 ntBASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 Y_RNA.689-201ENST00000516589 107 ntBASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 PSMA2P1-201ENST00000526365 646 ntBASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 AC087241.2-201ENST00000535801 324 ntBASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 AC002545.1-201ENST00000592511 181 ntBASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 AC103710.3-201ENST00000608157 948 ntBASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 AC100810.6-201ENST00000638068 285 ntBASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC187A0A096LP49 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 AC002546.1-201ENST00000588041 2504 ntBASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 RNU6-254P-201ENST00000363377 107 ntBASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 Y_RNA.315-201ENST00000365117 102 ntBASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 SNORA33.2-201ENST00000365413 134 ntBASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 RNU6-463P-201ENST00000384340 107 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms