Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 AL354685.2-201ENST00000448218 1447 ntBASIC3.27□□□□□ -1.89
CLDN16Q9Y5I7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 AL079305.1-201ENST00000623159 3008 ntBASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 RIOK3P1-201ENST00000418778 1528 ntBASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 SNORA14A-201ENST00000364773 135 ntBASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 AL160275.3-201ENST00000423876 471 ntBASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 TRIAP1P1-201ENST00000427062 225 ntBASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 RBMX2P4-201ENST00000441256 376 ntBASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 RPS29P31-201ENST00000446147 164 ntBASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 CECR9-201ENST00000453421 199 ntBASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 AC025518.1-201ENST00000479856 347 ntBASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 FCF1P3-201ENST00000496394 590 ntBASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 AC098591.2-201ENST00000510152 315 ntBASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 SNORD60.2-201ENST00000516883 86 ntBASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 MTND4P7-201ENST00000523876 130 ntBASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 DNAJC8P1-201ENST00000554535 372 ntBASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 AC008739.3-201ENST00000603262 127 ntBASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 AC024614.3-201ENST00000637860 256 ntBASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 AL049641.1-201ENST00000441055 1948 ntBASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN16Q9Y5I7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 RNA5SP139-201ENST00000364340 117 ntBASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 RNU4-66P-201ENST00000365199 138 ntBASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 MIR218-2-201ENST00000385006 110 ntBASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 MIR301A-201ENST00000385261 86 ntBASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 AL136116.1-201ENST00000403591 381 ntBASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 SNRPEP10-201ENST00000420249 274 ntBASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 AP000907.1-201ENST00000428428 510 ntBASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 RPL36AP53-201ENST00000432891 316 ntBASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 AL358232.1-201ENST00000448030 501 ntBASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 AC069439.1-201ENST00000494739 167 ntBASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 IGKV2-26-201ENST00000518305 343 ntBASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 SUB1P1-201ENST00000524415 382 ntBASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 AC010525.2-201ENST00000590920 195 ntBASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 U3.45-201ENST00000607547 219 ntBASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 MIR7851-201ENST00000610611 160 ntBASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 uc_338.34-201ENST00000617467 174 ntBASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN16Q9Y5I7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 OR4G1P-203ENST00000641984 1631 ntBASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 RNU6-451P-201ENST00000362921 107 ntBASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 RNU6-1283P-201ENST00000365314 105 ntBASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 SNORA4.3-201ENST00000365564 137 ntBASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 MIR23B-201ENST00000384832 97 ntBASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 ZNF863P-201ENST00000426746 417 ntBASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 CALM1P1-201ENST00000442082 433 ntBASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 WASF1P1-201ENST00000447560 1131 ntBASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 AL031183.1-201ENST00000457667 207 ntBASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 RPS4XP2-201ENST00000458402 793 ntBASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 RPL21P13-201ENST00000488305 481 ntBASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 RNU2-27P-201ENST00000516185 142 ntBASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 RNU6-1282P-201ENST00000516735 96 ntBASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 RNA5SP165-201ENST00000517142 115 ntBASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.24□□□□□ -1.89
CLDN16Q9Y5I7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms