Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC110491.1-201ENST00000562191 2010 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 SNORA68.1-201ENST00000364537 132 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 RNY3P10-201ENST00000384764 102 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 RPL21P3-201ENST00000395517 478 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 RPS15AP12-201ENST00000419498 388 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 SEPT2P1-201ENST00000419651 180 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 AC093151.1-201ENST00000427711 313 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 AC098826.1-201ENST00000433943 471 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 MTND2P4-201ENST00000445034 1004 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 EEF1B2P7-201ENST00000451177 676 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 RNU6-953P-201ENST00000459154 107 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 AC146507.2-201ENST00000460608 476 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 MTCO2P29-201ENST00000465212 189 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 AC010587.1-201ENST00000505809 469 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 AC098799.2-201ENST00000509466 868 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 Y_RNA.672-201ENST00000516289 104 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 RNU1-143P-201ENST00000516296 146 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 RNU2-10P-201ENST00000516375 211 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 RNU6-143P-201ENST00000516942 93 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 RNA5SP337-201ENST00000517007 109 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 MIR3616-201ENST00000584070 92 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 U1.23-201ENST00000610293 146 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 AC091304.9-201ENST00000612091 226 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 RNU1-68P-201ENST00000615382 146 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 U1.39-201ENST00000621562 146 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 AC084035.1-201ENST00000634543 607 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 MIR3199-2-201ENST00000636243 86 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 ELF2P3-201ENST00000445099 1506 ntBASIC2.83□□□□□ -1.96
PCDHGA1Q9Y5H4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 FGF7P2-201ENST00000332473 296 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 RNU5E-6P-201ENST00000365574 115 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 SET-203ENST00000372688 801 ntTSL 2 BASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 RNU6-701P-201ENST00000384059 107 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 SNORA18.3-201ENST00000384122 132 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 RNU6-14P-201ENST00000384630 106 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 RNU6-750P-201ENST00000390946 107 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 AL360182.1-201ENST00000397433 468 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 RNU2-36P-201ENST00000410361 191 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 RNA5SP508-201ENST00000411327 119 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 RPS3AP3-201ENST00000411933 242 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 BPY2DP-201ENST00000422208 265 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 RAC1P6-201ENST00000423911 575 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 ISCA1P1-201ENST00000426679 387 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 USP9YP15-201ENST00000442391 422 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 MTND6P13-201ENST00000443510 523 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 OSTCP8-201ENST00000445117 448 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 MTND1P3-201ENST00000484956 952 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 RNU2-46P-201ENST00000517038 113 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 SCARNA11.3-201ENST00000517276 130 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 AC011979.2-201ENST00000527568 352 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 AP002770.2-201ENST00000543613 532 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 AC098826.3-201ENST00000603823 466 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 AL161798.1-201ENST00000604630 131 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 AC073114.1-201ENST00000612027 490 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDHGA1Q9Y5H4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 RNA5SP432-201ENST00000362480 116 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 RN7SKP226-201ENST00000364912 300 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 RNU1-73P-201ENST00000383971 164 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 MIR9-1-201ENST00000385198 89 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 HMGN1P14-201ENST00000412459 517 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 AC137499.1-201ENST00000427602 88 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 AC244505.4-201ENST00000434905 287 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 HMGB3P12-201ENST00000438745 556 ntBASIC2.81□□□□□ -1.96
PCDHGA1Q9Y5H4 SSXP5-201ENST00000443473 287 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms