Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 UBE2FP1-201ENST00000416536 447 ntBASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 TOMM22P1-201ENST00000418578 312 ntBASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 AC073063.1-201ENST00000434352 607 ntBASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 HMGN2P20-201ENST00000437531 273 ntBASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 AC007967.1-201ENST00000455422 1159 ntBASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 AL136097.1-201ENST00000456945 913 ntBASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 RNU7-66P-201ENST00000459469 62 ntBASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 RPS27AP1-201ENST00000475545 471 ntBASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 AC027575.1-201ENST00000481064 460 ntBASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 HMGB3P15-201ENST00000507326 574 ntBASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 RNA5SP208-201ENST00000516156 78 ntBASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 Y_RNA.718-201ENST00000517110 102 ntBASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 RN7SKP289-201ENST00000517244 295 ntBASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 AL137161.1-201ENST00000532231 390 ntBASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 MIR5583-1-201ENST00000580941 59 ntBASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 MIR3942-201ENST00000585264 109 ntBASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 AC080078.3-201ENST00000605407 463 ntBASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 API5P2-201ENST00000397055 1498 ntBASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTDP1Q9Y5B0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 RNU6-50P-201ENST00000362356 103 ntBASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 RNU6-629P-201ENST00000384061 103 ntBASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 MIR34B-201ENST00000385076 84 ntBASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 MIR591-201ENST00000385290 95 ntBASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 MIR548F5-201ENST00000408421 86 ntBASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 BX842559.1-201ENST00000419615 532 ntBASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 AC093106.2-201ENST00000428212 385 ntBASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 AC107399.1-201ENST00000451226 265 ntBASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 AC130509.1-201ENST00000464158 433 ntBASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 HMGB1P25-201ENST00000468402 607 ntBASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 AC084198.1-201ENST00000477747 402 ntBASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 CCDC34P1-201ENST00000507441 517 ntBASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 AC108078.2-201ENST00000510750 236 ntBASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 RNU1-61P-201ENST00000516107 151 ntBASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 AC103783.1-201ENST00000520506 373 ntBASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 AC090877.1-201ENST00000561418 344 ntBASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 BNIP3P25-201ENST00000596023 559 ntBASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 AC243312.2-201ENST00000623340 601 ntBASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 AP000553.6-201ENST00000641242 118 ntBASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CTDP1Q9Y5B0 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 RNU6-1284P-201ENST00000363701 100 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 RNA5SP50-201ENST00000363731 107 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 SNORD113-7-201ENST00000363762 77 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 SNORD42.2-201ENST00000365570 69 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 RNU6-474P-201ENST00000384243 107 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 SNORD116-29-201ENST00000384516 83 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 SOD2P1-201ENST00000396543 562 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 HLFP1-201ENST00000402375 499 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 RNU4-46P-201ENST00000410818 138 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 RHEBP3-201ENST00000411920 351 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 AC092447.6-201ENST00000414578 210 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 VN1R36P-201ENST00000414936 291 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 RPL21P109-201ENST00000422213 475 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 RPL7P46-201ENST00000425129 740 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 PRDX3P3-201ENST00000447765 522 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 Y_RNA.631-201ENST00000459607 101 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 RN7SL330P-201ENST00000469709 307 ntBASIC4.26□□□□□ -1.73
CTDP1Q9Y5B0 AC010285.1-201ENST00000470580 392 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms