Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 RNU6-395P-201ENST00000365662 106 ntBASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 Y_RNA.480-201ENST00000384364 102 ntBASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 AL356057.2-201ENST00000403318 432 ntBASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 RPL37P10-201ENST00000412884 288 ntBASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 AF228730.4-201ENST00000421457 183 ntBASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 AL590632.1-201ENST00000424289 371 ntBASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 AL135752.1-201ENST00000479477 471 ntBASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 RN7SL604P-201ENST00000492589 296 ntBASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 RPS27P27-201ENST00000498779 255 ntBASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 RN7SKP13-201ENST00000515933 244 ntBASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 AC009902.1-201ENST00000519351 183 ntBASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 TOMM20P2-201ENST00000540082 421 ntBASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 AC025423.5-201ENST00000550230 219 ntBASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 AC007151.1-201ENST00000572774 483 ntBASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 AC022655.2-201ENST00000577280 318 ntBASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 AL627309.6-201ENST00000606857 840 ntBASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 AC006023.2-201ENST00000609916 167 ntBASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 AC112484.5-201ENST00000624189 228 ntBASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
R3HCC1Q9Y3T6 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 SNORA60-201ENST00000362396 134 ntBASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 RNU6-562P-201ENST00000362731 107 ntBASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 AL022722.2-201ENST00000402519 180 ntBASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 AL139396.1-201ENST00000421137 167 ntBASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 AC092573.2-201ENST00000434546 243 ntBASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 AC236972.2-201ENST00000434979 310 ntBASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 FABP5P14-201ENST00000437273 393 ntBASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 Z82210.1-201ENST00000440037 231 ntBASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 AC026784.1-201ENST00000507986 352 ntBASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 RNA5SP165-201ENST00000517142 115 ntBASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 RNA5SP291-201ENST00000517222 105 ntBASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 IGKV2D-19-201ENST00000523346 262 ntBASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 CBX3P7-201ENST00000532876 502 ntBASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.49□□□□□ -1.69
R3HCC1Q9Y3T6 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 RNU6-1297P-201ENST00000384415 104 ntBASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 AL360182.1-201ENST00000397433 468 ntBASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 AL592148.1-201ENST00000413568 445 ntBASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 SAR1AP4-201ENST00000429225 591 ntBASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 AC091390.1-201ENST00000433904 331 ntBASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 RNU7-170P-201ENST00000459303 61 ntBASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 RPL39P5-202ENST00000512505 151 ntBASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 Y_RNA.718-201ENST00000517110 102 ntBASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 AC087854.1-201ENST00000519706 414 ntBASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 AC025755.1-201ENST00000521306 278 ntBASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 AC136624.4-201ENST00000573044 370 ntBASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 AC053481.4-201ENST00000583164 216 ntBASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 AC004805.2-201ENST00000605382 482 ntBASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
R3HCC1Q9Y3T6 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.47□□□□□ -1.69
R3HCC1Q9Y3T6 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
R3HCC1Q9Y3T6 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms