Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 RNY1P16-201ENST00000363063 111 ntBASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 RNU6-1062P-201ENST00000383908 107 ntBASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 MIR30B-201ENST00000384850 88 ntBASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 SNORD73A-201ENST00000386062 65 ntBASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 RN7SKP156-201ENST00000410308 342 ntBASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 RNU2-38P-201ENST00000410856 79 ntBASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 RPS15AP6-201ENST00000420703 385 ntBASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 HMGB1P27-201ENST00000431429 603 ntBASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 PRDX3P3-201ENST00000447765 522 ntBASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 RPS11P1-201ENST00000451072 473 ntBASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 MTND3P25-201ENST00000509243 135 ntBASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 ACA59.1-201ENST00000515966 143 ntBASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 RN7SKP234-201ENST00000517173 224 ntBASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 RNU6-840P-201ENST00000517275 65 ntBASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 AC026403.1-201ENST00000518938 295 ntBASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 AC006600.1-201ENST00000572529 153 ntBASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 RPL23AP87-202ENST00000573039 466 ntBASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 SRGNP1-201ENST00000603392 451 ntBASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RTCBQ9Y3I0 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 SNORA60-201ENST00000362396 134 ntBASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 Y_RNA.48-201ENST00000362710 103 ntBASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 Y_RNA.60-201ENST00000362831 98 ntBASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 SNORA9-201ENST00000384215 133 ntBASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 AC091286.1-201ENST00000431233 461 ntBASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 TBCAP1-201ENST00000436520 327 ntBASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 RPL39P38-201ENST00000467018 153 ntBASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 MTND1P19-201ENST00000511780 315 ntBASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 RNU6-914P-201ENST00000516749 109 ntBASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 CBX3P8-201ENST00000532412 525 ntBASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 VN1R91P-201ENST00000594377 169 ntBASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 MIR6868-201ENST00000611215 58 ntBASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 AL672167.1-203ENST00000641299 2975 ntBASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 AC009093.8-201ENST00000641769 292 ntBASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 PRO1804-201ENST00000623780 2050 ntBASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.22□□□□□ -1.57
RTCBQ9Y3I0 ZNF285B-201ENST00000561698 1767 ntBASIC5.21□□□□□ -1.57
RTCBQ9Y3I0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RTCBQ9Y3I0 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RTCBQ9Y3I0 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
RTCBQ9Y3I0 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
RTCBQ9Y3I0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 Y_RNA.562-201ENST00000384695 113 ntBASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 MIR578-201ENST00000384828 96 ntBASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 MIR483-201ENST00000385070 76 ntBASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 RPL12P46-201ENST00000436610 195 ntBASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 AL360271.2-201ENST00000447710 161 ntBASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 SNORA40.15-201ENST00000516884 107 ntBASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 SNRPGP16-201ENST00000533275 226 ntBASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 CYCSP30-201ENST00000546447 172 ntBASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 LRRC37A5P-203ENST00000580181 585 ntBASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 RAC1P9-201ENST00000604990 392 ntBASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 AC096772.1-201ENST00000609146 564 ntBASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 AL391261.4-201ENST00000616012 481 ntBASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 MIR8069-1-201ENST00000616627 86 ntBASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 MIR8069-2-201ENST00000621412 86 ntBASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 FP236240.3-201ENST00000623061 327 ntBASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RTCBQ9Y3I0 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.2□□□□□ -1.58
RTCBQ9Y3I0 AP001642.1-201ENST00000624727 2117 ntBASIC5.2□□□□□ -1.58
RTCBQ9Y3I0 Y_RNA.64-201ENST00000362845 102 ntBASIC5.2□□□□□ -1.58
RTCBQ9Y3I0 RNU6-1249P-201ENST00000363237 111 ntBASIC5.2□□□□□ -1.58
RTCBQ9Y3I0 Y_RNA.117-201ENST00000363294 101 ntBASIC5.2□□□□□ -1.58
RTCBQ9Y3I0 RNU6-770P-201ENST00000363929 105 ntBASIC5.2□□□□□ -1.58
RTCBQ9Y3I0 RNY3P11-201ENST00000364153 102 ntBASIC5.2□□□□□ -1.58
RTCBQ9Y3I0 RNU4-50P-201ENST00000364361 141 ntBASIC5.2□□□□□ -1.58
RTCBQ9Y3I0 MIR625-201ENST00000385047 85 ntBASIC5.2□□□□□ -1.58
RTCBQ9Y3I0 RNU6-712P-201ENST00000410558 100 ntBASIC5.2□□□□□ -1.58
RTCBQ9Y3I0 RNU6-607P-201ENST00000411283 108 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms