Protein–RNA interactions for Protein: Q9Y2N7

HIF3A, Hypoxia-inducible factor 3-alpha, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3AQ9Y2N7 U3.36-201ENST00000408418 213 ntBASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 RNU4-30P-201ENST00000410245 143 ntBASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 RNU2-51P-201ENST00000410708 197 ntBASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 RPL19P1-201ENST00000411635 428 ntBASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 AL627311.1-201ENST00000431514 115 ntBASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 Z82188.1-201ENST00000436709 154 ntBASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 RN7SL172P-201ENST00000460535 303 ntBASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 AC010326.1-201ENST00000462726 602 ntBASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 NIP7P2-201ENST00000485801 544 ntBASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 AL160314.1-201ENST00000490836 438 ntBASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 COX6B1P5-201ENST00000509843 249 ntBASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 RNA5SP43-201ENST00000516559 110 ntBASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 SNORA31.18-201ENST00000517043 134 ntBASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 SNORA31.20-201ENST00000517111 133 ntBASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 Y_RNA.719-201ENST00000517156 106 ntBASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 AP004371.1-201ENST00000525240 214 ntBASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 CYCSP40-201ENST00000575927 294 ntBASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 AC008121.1-201ENST00000603244 268 ntBASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 SRGNP1-201ENST00000603392 451 ntBASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 AC008725.1-201ENST00000605123 2263 ntBASIC4.46□□□□□ -1.7
HIF3AQ9Y2N7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 Y_RNA.233-201ENST00000364407 101 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 Y_RNA.245-201ENST00000364493 95 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 RNU6-1117P-201ENST00000384525 104 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 Y_RNA.590-201ENST00000410140 107 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 RNU6-735P-201ENST00000410612 107 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 Z85995.1-201ENST00000415547 335 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 AC244098.2-201ENST00000422068 99 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 RPL34P20-201ENST00000442771 351 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 NUTF2P3-201ENST00000448540 384 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 RPS29P27-201ENST00000463711 170 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 RPS26P21-201ENST00000475397 348 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 RPL23AP65-201ENST00000475608 468 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 RN7SL222P-201ENST00000476452 299 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 AC020890.1-201ENST00000491837 504 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 AC072052.1-201ENST00000496556 306 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 AC025755.1-201ENST00000521306 278 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 MIR3921-201ENST00000577308 85 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 MIR3936-201ENST00000584304 110 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 AL645944.1-201ENST00000603857 493 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 AL591926.8-201ENST00000616876 211 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 AC090617.7-201ENST00000623952 126 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 DHX9P1-201ENST00000436565 3076 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 AL356489.2-201ENST00000566968 3528 ntBASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HIF3AQ9Y2N7 AC000123.3-201ENST00000624029 4975 ntBASIC4.44□□□□□ -1.7
HIF3AQ9Y2N7 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HIF3AQ9Y2N7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HIF3AQ9Y2N7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
HIF3AQ9Y2N7 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HIF3AQ9Y2N7 MIR223-201ENST00000385204 110 ntBASIC4.44□□□□□ -1.7
HIF3AQ9Y2N7 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HIF3AQ9Y2N7 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.44□□□□□ -1.7
HIF3AQ9Y2N7 AC140479.3-201ENST00000418944 1126 ntBASIC4.44□□□□□ -1.7
HIF3AQ9Y2N7 CKS1BP6-201ENST00000424932 240 ntBASIC4.44□□□□□ -1.7
HIF3AQ9Y2N7 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.44□□□□□ -1.7
HIF3AQ9Y2N7 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.44□□□□□ -1.7
HIF3AQ9Y2N7 COX6CP14-201ENST00000469580 174 ntBASIC4.44□□□□□ -1.7
HIF3AQ9Y2N7 RN7SL244P-201ENST00000493405 297 ntBASIC4.44□□□□□ -1.7
HIF3AQ9Y2N7 AC104164.2-201ENST00000496953 495 ntBASIC4.44□□□□□ -1.7
HIF3AQ9Y2N7 RNY3P16-201ENST00000516338 101 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms