Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 RNU7-180P-201ENST00000459240 63 ntBASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 RPL31P13-201ENST00000484151 370 ntBASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 RN7SKP83-201ENST00000516512 178 ntBASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 RNU6-840P-201ENST00000517275 65 ntBASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 AC087241.2-201ENST00000535801 324 ntBASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 PSMA3P-201ENST00000555485 635 ntBASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 MIR4424-201ENST00000585257 86 ntBASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 AC006077.1-201ENST00000604746 343 ntBASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 SDR42E1P2-201ENST00000614861 481 ntBASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 AC009248.2-201ENST00000619826 254 ntBASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 PLCE1P1-201ENST00000622094 305 ntBASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 MTND4P35-201ENST00000604257 1375 ntBASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 RNA5SP295-201ENST00000362655 121 ntBASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 RNA5SP235-201ENST00000365411 114 ntBASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 RNU4-20P-201ENST00000365601 151 ntBASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 MIR607-201ENST00000385241 96 ntBASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 RNU4-46P-201ENST00000410818 138 ntBASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 RNA5SP120-201ENST00000410900 112 ntBASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 PDCL2P1-201ENST00000419302 352 ntBASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 AC018630.2-202ENST00000422992 927 ntBASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 RPL21P112-201ENST00000434403 463 ntBASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 TXNP1-201ENST00000441872 371 ntBASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 FGF7P4-201ENST00000509595 295 ntBASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 RNU6-1314P-201ENST00000517139 104 ntBASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 SNORA31.22-201ENST00000517204 135 ntBASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 ERHP1-201ENST00000523006 310 ntBASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 MTND4P7-201ENST00000523876 130 ntBASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 RANP3-201ENST00000530970 276 ntBASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 AL137161.1-201ENST00000532231 390 ntBASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 GLYCAM1-201ENST00000546596 285 ntBASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 RPS3AP23-202ENST00000574601 686 ntBASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 AC010133.1-201ENST00000615809 842 ntBASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 uc_338.34-201ENST00000617467 174 ntBASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSX2IPQ9Y2D8 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 AL672296.1-201ENST00000427780 2158 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 RNU4-73P-201ENST00000363164 141 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 SNORA38.1-201ENST00000364172 131 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 RNU6-173P-201ENST00000364215 104 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 SNORA32.2-201ENST00000384049 122 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 Y_RNA.529-201ENST00000384586 119 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 AP000567.1-201ENST00000406413 156 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 RN7SKP111-201ENST00000410349 271 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 Y_RNA.615-201ENST00000410769 117 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 RPL31P12-201ENST00000422587 358 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 RPL7P46-201ENST00000425129 740 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 MTCO1P39-201ENST00000426148 480 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 AC024082.2-201ENST00000434771 238 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 IFNA20P-201ENST00000436840 528 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 AC006539.3-201ENST00000454258 129 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 AC098591.2-201ENST00000510152 315 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 PHBP14-201ENST00000512887 367 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 AC010265.1-201ENST00000513509 211 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 GMPSP1-201ENST00000514075 579 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 RNU2-27P-201ENST00000516185 142 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 RNU6-579P-201ENST00000516879 102 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 RNU6-685P-201ENST00000517088 95 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 BTF3P12-201ENST00000519620 469 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 AC008489.1-201ENST00000524271 483 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms