Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MIR1273C-201ENST00000578669 77 ntBASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 MIR4286-201ENST00000580651 93 ntBASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 AC107294.1-201ENST00000609524 467 ntBASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 MIR8076-201ENST00000611401 83 ntBASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 U6.92-201ENST00000636464 89 ntBASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
ZC3H4Q9UPT8 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 Y_RNA.143-201ENST00000363520 106 ntBASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 AC104333.2-201ENST00000422630 192 ntBASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 AL606753.1-201ENST00000427435 87 ntBASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 AC007389.2-201ENST00000434630 306 ntBASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 Y_RNA.644-201ENST00000459006 113 ntBASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 RPL30P10-201ENST00000488148 337 ntBASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 RNU6-927P-201ENST00000516199 100 ntBASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 Y_RNA.674-201ENST00000516362 113 ntBASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 AC103996.1-201ENST00000555468 102 ntBASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 HMGB1P14-201ENST00000557424 591 ntBASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 AC136932.1-201ENST00000574771 208 ntBASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 AC243829.7-201ENST00000633081 225 ntBASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
ZC3H4Q9UPT8 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 Y_RNA.333-201ENST00000365274 102 ntBASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 RNU6-378P-201ENST00000384324 107 ntBASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 SNORD115-46-201ENST00000390982 71 ntBASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 MRPL35P1-201ENST00000404272 572 ntBASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 Y_RNA.602-201ENST00000410535 92 ntBASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 RNU6-1025P-201ENST00000410629 104 ntBASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 CRYBB2P1-203ENST00000415709 538 ntBASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 PIGFP3-201ENST00000441918 722 ntBASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 AL445433.1-201ENST00000457507 257 ntBASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 SCARNA10-201ENST00000459255 330 ntBASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 snoU13.3-201ENST00000459441 104 ntBASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 AL049874.1-201ENST00000489560 388 ntBASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 PARP4P3-201ENST00000510265 317 ntBASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 SERF1AP1-201ENST00000514575 187 ntBASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 RNU6-255P-201ENST00000516957 105 ntBASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 AC004024.1-201ENST00000549244 247 ntBASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 AC073657.2-201ENST00000605661 303 ntBASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
ZC3H4Q9UPT8 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 HAUS6P2-201ENST00000433254 2404 ntBASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 RNU5A-1-201ENST00000362698 116 ntBASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 Y_RNA.464-201ENST00000384282 110 ntBASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 SNORA36C-201ENST00000384289 132 ntBASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 MIR449B-201ENST00000384995 97 ntBASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 PCNPP3-201ENST00000393579 471 ntBASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 RPL26P6-201ENST00000440913 438 ntBASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 ISCUP1-201ENST00000454451 448 ntBASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 AK3P2-201ENST00000507976 429 ntBASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 AL359273.1-201ENST00000510918 627 ntBASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 AC006499.6-201ENST00000511169 607 ntBASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 SNORA25.14-201ENST00000516481 132 ntBASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 RNU6-709P-201ENST00000517257 104 ntBASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 AL442163.3-201ENST00000554110 156 ntBASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 AC010620.2-201ENST00000600135 313 ntBASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 AC098826.3-201ENST00000603823 466 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms