Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 RAD17P1-201ENST00000418130 2042 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 OR56B2P-202ENST00000641377 2453 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 AC009812.4-201ENST00000569134 1805 ntBASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 AL049555.1-201ENST00000562834 1933 ntBASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 AL391987.6-201ENST00000305671 199 ntBASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 RPL9P7-201ENST00000330965 580 ntBASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 Y_RNA.297-201ENST00000364950 91 ntBASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 Y_RNA.352-201ENST00000365439 102 ntBASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 RNA5SP372-201ENST00000390836 115 ntBASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 RNA5SP332-201ENST00000391063 115 ntBASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 PCNPP3-201ENST00000393579 471 ntBASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 MIR937-201ENST00000401271 86 ntBASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 AL513043.1-201ENST00000439124 535 ntBASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 RPL9P9-202ENST00000466501 579 ntBASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 MED28P2-201ENST00000475771 317 ntBASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 AC026784.1-201ENST00000507986 352 ntBASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 OR51K1P-201ENST00000510214 950 ntBASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 AC074250.1-201ENST00000511117 192 ntBASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 MIR1273C-201ENST00000578669 77 ntBASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 AC006557.5-201ENST00000603126 811 ntBASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 MFSD8-242ENST00000641690 4199 ntBASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 AL139811.1-201ENST00000424779 2299 ntBASIC4.6□□□□□ -1.67
AP4E1Q9UPM8 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 Y_RNA.27-201ENST00000362540 103 ntBASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 RNU6-384P-201ENST00000364900 104 ntBASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 RNA5SP22-201ENST00000365393 109 ntBASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 RNU6-746P-201ENST00000384112 109 ntBASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 Y_RNA.458-201ENST00000384240 102 ntBASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 RNU6-886P-201ENST00000384319 105 ntBASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 MIR192-201ENST00000384915 110 ntBASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 MIR129-1-201ENST00000384972 72 ntBASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 RNU6-837P-201ENST00000391056 108 ntBASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 AL603910.2-201ENST00000407268 136 ntBASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 AL513331.1-201ENST00000411908 397 ntBASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 AC009237.10-201ENST00000414112 510 ntBASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 AC096920.1-201ENST00000423991 241 ntBASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 RPL23AP1-201ENST00000428990 471 ntBASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 AC087650.1-201ENST00000431445 468 ntBASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 AC087588.1-201ENST00000462203 316 ntBASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 IGKV2-23-201ENST00000518729 323 ntBASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 AC026951.1-201ENST00000559530 2459 ntBASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 AC009318.2-201ENST00000610917 651 ntBASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 U73479.1-201ENST00000618062 168 ntBASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.59□□□□□ -1.67
AP4E1Q9UPM8 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
AP4E1Q9UPM8 Z75746.1-201ENST00000440243 2080 ntBASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 RNU6-774P-201ENST00000363238 107 ntBASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 Y_RNA.270-201ENST00000364693 104 ntBASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 RNU6-395P-201ENST00000365662 106 ntBASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 MIR521-1-201ENST00000384902 87 ntBASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 MRPL35P1-201ENST00000404272 572 ntBASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 RNA5SP494-201ENST00000410653 129 ntBASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 HIGD1AP2-201ENST00000446367 280 ntBASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 RNU4-71P-201ENST00000516258 113 ntBASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 Y_RNA.713-201ENST00000517013 96 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms