Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-1037P-201ENST00000459571 107 ntBASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 RN7SL283P-201ENST00000489055 303 ntBASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 SNORA40.14-201ENST00000516543 86 ntBASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 IGLVIV-65-201ENST00000517313 360 ntBASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 AC016727.2-201ENST00000603988 621 ntBASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 Z98751.3-201ENST00000604447 521 ntBASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 AC107871.2-201ENST00000612894 502 ntBASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 AC140113.4-201ENST00000622087 222 ntBASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 AC138627.2-201ENST00000624202 601 ntBASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 MIR4272-201ENST00000635924 64 ntBASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 AC008669.1-201ENST00000565823 2178 ntBASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 AC125257.1-201ENST00000560400 2930 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 RNU1-83P-201ENST00000363426 164 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 Y_RNA.188-201ENST00000363952 111 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 U8.8-201ENST00000365399 135 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-1279P-201ENST00000383917 103 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-790P-201ENST00000384479 105 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 MIR195-201ENST00000385194 87 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 MIR670-201ENST00000390142 98 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 AL022722.2-201ENST00000402519 180 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 SNORA11F-201ENST00000408237 128 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 RNU2-33P-201ENST00000410344 192 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 AL356867.1-201ENST00000429623 299 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 RPS29P17-201ENST00000430795 166 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 AL031274.1-201ENST00000450334 232 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 CHEK2P4-201ENST00000450340 246 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 SCARNA10-201ENST00000459255 330 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 RPS17P2-201ENST00000461663 408 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 UQCRHP4-201ENST00000471686 272 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 ACA59.1-201ENST00000515966 143 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 IGKV2D-23-201ENST00000518179 286 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 CBX3P8-201ENST00000532412 525 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 AL138825.1-201ENST00000618587 192 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 FP236240.3-201ENST00000623061 327 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 AL672167.1-203ENST00000641299 2975 ntBASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CDC42EP3Q9UKI2 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 AL359693.1-201ENST00000614959 2407 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 SNORD14B-201ENST00000364533 90 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-450P-201ENST00000364654 107 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-99P-201ENST00000364721 107 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 AL591034.2-201ENST00000402839 359 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 AL513475.1-201ENST00000406602 315 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 SNORA11.1-201ENST00000408133 129 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 MIR1252-201ENST00000408861 65 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-1156P-201ENST00000410365 100 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 SNORD56-201ENST00000413522 71 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 RAC1P3-201ENST00000416129 580 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 AC004552.1-201ENST00000419089 348 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 RPL7AP25-201ENST00000423357 805 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 snoU13.22-201ENST00000459428 104 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 RPS26P3-201ENST00000470205 348 ntBASIC3.8□□□□□ -1.8
CDC42EP3Q9UKI2 AC090543.2-201ENST00000483963 348 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms