Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC107304.1-201ENST00000604229 296 ntBASIC2.76□□□□□ -1.97
NDE1Q9NXR1 AC007179.3-201ENST00000604976 235 ntBASIC2.76□□□□□ -1.97
NDE1Q9NXR1 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NDE1Q9NXR1 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
NDE1Q9NXR1 AL589994.2-201ENST00000621124 579 ntBASIC2.76□□□□□ -1.97
NDE1Q9NXR1 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NDE1Q9NXR1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
NDE1Q9NXR1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NDE1Q9NXR1 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.76□□□□□ -1.97
NDE1Q9NXR1 ZNF807-201ENST00000328088 1707 ntBASIC2.76□□□□□ -1.97
NDE1Q9NXR1 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
NDE1Q9NXR1 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NDE1Q9NXR1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.75□□□□□ -1.97
NDE1Q9NXR1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NDE1Q9NXR1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
NDE1Q9NXR1 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NDE1Q9NXR1 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
NDE1Q9NXR1 Y_RNA.6-201ENST00000362350 114 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 RNA5SP124-201ENST00000362739 110 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 RNU6-1284P-201ENST00000363701 100 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 SNORA25.6-201ENST00000364121 118 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 RNU5E-6P-201ENST00000365574 115 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NDE1Q9NXR1 RNU6-1027P-201ENST00000383998 107 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 MTCO3P40-201ENST00000392516 676 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 FO393413.1-201ENST00000402892 195 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 NDUFS5P1-201ENST00000405668 289 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 RNU6-648P-201ENST00000410190 107 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 RN7SKP220-201ENST00000410611 288 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.75□□□□□ -1.97
NDE1Q9NXR1 AC018630.2-202ENST00000422992 927 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 RPS3AP44-201ENST00000425466 790 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 ISCA1P1-201ENST00000426679 387 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 MTCO2P19-201ENST00000427513 598 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 GPR143P-201ENST00000434155 205 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 USP9YP28-201ENST00000435142 589 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 SNRPEP4-201ENST00000435815 279 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 AL513043.1-201ENST00000439124 535 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NDE1Q9NXR1 RPL23AP20-201ENST00000447965 421 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.75□□□□□ -1.97
NDE1Q9NXR1 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.75□□□□□ -1.97
NDE1Q9NXR1 AC117440.1-201ENST00000474107 571 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 AC023194.1-201ENST00000493084 308 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 AC026427.2-201ENST00000506228 536 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 SEM1P1-201ENST00000506694 209 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NDE1Q9NXR1 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.75□□□□□ -1.97
NDE1Q9NXR1 AC010493.1-201ENST00000513479 292 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 RNU2-10P-201ENST00000516375 211 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 SNORA70.16-201ENST00000516390 95 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 RNU7-51P-201ENST00000516560 62 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NDE1Q9NXR1 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.75□□□□□ -1.97
NDE1Q9NXR1 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.75□□□□□ -1.97
NDE1Q9NXR1 AC098848.2-201ENST00000588023 330 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.75□□□□□ -1.97
NDE1Q9NXR1 AC025449.1-201ENST00000603896 529 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 CR381653.2-201ENST00000624041 768 ntBASIC2.75□□□□□ -1.97
NDE1Q9NXR1 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.75□□□□□ -1.97
NDE1Q9NXR1 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.75□□□□□ -1.97
NDE1Q9NXR1 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
NDE1Q9NXR1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.74□□□□□ -1.97
NDE1Q9NXR1 HSPE1P11-201ENST00000339579 310 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
NDE1Q9NXR1 RNU6-641P-201ENST00000384006 107 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 RNU6-1103P-201ENST00000384150 107 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 MIR558-201ENST00000384920 94 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 MIR514A1-201ENST00000385133 98 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 MIR493-201ENST00000385254 89 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 RN7SKP140-201ENST00000411196 284 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.74□□□□□ -1.97
NDE1Q9NXR1 FCF1P9-201ENST00000412546 282 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.74□□□□□ -1.97
NDE1Q9NXR1 RPL27AP8-201ENST00000424277 446 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.74□□□□□ -1.97
NDE1Q9NXR1 AC091390.3-201ENST00000426478 338 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 RPL7L1P10-201ENST00000427790 463 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.74□□□□□ -1.97
NDE1Q9NXR1 MTATP6P16-201ENST00000434543 526 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NDE1Q9NXR1 CYCSP35-201ENST00000451978 304 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 MTND2P24-201ENST00000453434 806 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 AC027673.1-201ENST00000456245 405 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 RPL31P60-201ENST00000478450 367 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.74□□□□□ -1.97
NDE1Q9NXR1 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.74□□□□□ -1.97
NDE1Q9NXR1 RNU6-718P-201ENST00000516166 105 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 Y_RNA.704-201ENST00000516851 102 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.74□□□□□ -1.97
NDE1Q9NXR1 MTND1P5-201ENST00000517906 940 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.74□□□□□ -1.97
NDE1Q9NXR1 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.74□□□□□ -1.97
NDE1Q9NXR1 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.74□□□□□ -1.97
NDE1Q9NXR1 AC100870.1-201ENST00000522035 505 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.74□□□□□ -1.97
NDE1Q9NXR1 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
NDE1Q9NXR1 AC093012.1-202ENST00000549403 582 ntBASIC2.74□□□□□ -1.97
NDE1Q9NXR1 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms