Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RN7SL303P-201ENST00000469773 251 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 AC006463.2-201ENST00000473326 348 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 RPL7P43-201ENST00000478876 753 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 AC011005.2-201ENST00000487324 359 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.86□□□□□ -1.79
MKS1Q9NXB0 FGF7P4-201ENST00000509595 295 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.86□□□□□ -1.79
MKS1Q9NXB0 MIR892C-201ENST00000516410 77 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 RNU6-256P-201ENST00000516747 97 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 SNORA31.19-201ENST00000517079 126 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
MKS1Q9NXB0 RPS3AP23-202ENST00000574601 686 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 MIR4700-201ENST00000578311 74 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 MIR4330-201ENST00000579077 105 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.86□□□□□ -1.79
MKS1Q9NXB0 MIR3609-201ENST00000582661 80 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.86□□□□□ -1.79
MKS1Q9NXB0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.86□□□□□ -1.79
MKS1Q9NXB0 AC243960.4-201ENST00000600532 288 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 HSPE1P7-201ENST00000604681 321 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 AC008962.1-201ENST00000605729 304 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.86□□□□□ -1.79
MKS1Q9NXB0 AC009233.1-201ENST00000616477 371 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.86□□□□□ -1.79
MKS1Q9NXB0 AL133216.2-202ENST00000634512 349 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.86□□□□□ -1.79
MKS1Q9NXB0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
MKS1Q9NXB0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.86□□□□□ -1.79
MKS1Q9NXB0 CEP170P1-201ENST00000502249 4587 ntBASIC3.86□□□□□ -1.79
MKS1Q9NXB0 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
MKS1Q9NXB0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
MKS1Q9NXB0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
MKS1Q9NXB0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
MKS1Q9NXB0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.85□□□□□ -1.79
MKS1Q9NXB0 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
MKS1Q9NXB0 MIR383-201ENST00000362257 73 ntBASIC3.85□□□□□ -1.79
MKS1Q9NXB0 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.85□□□□□ -1.79
MKS1Q9NXB0 Y_RNA.184-201ENST00000363884 108 ntBASIC3.85□□□□□ -1.79
MKS1Q9NXB0 RNA5SP509-201ENST00000364577 119 ntBASIC3.85□□□□□ -1.79
MKS1Q9NXB0 Y_RNA.529-201ENST00000384586 119 ntBASIC3.85□□□□□ -1.79
MKS1Q9NXB0 VN1R36P-201ENST00000414936 291 ntBASIC3.85□□□□□ -1.79
MKS1Q9NXB0 NCOR1P3-201ENST00000420479 303 ntBASIC3.85□□□□□ -1.79
MKS1Q9NXB0 AL583843.1-201ENST00000456070 346 ntBASIC3.85□□□□□ -1.79
MKS1Q9NXB0 AMD1P1-201ENST00000457220 922 ntBASIC3.85□□□□□ -1.79
MKS1Q9NXB0 RPL30P14-201ENST00000482744 348 ntBASIC3.85□□□□□ -1.79
MKS1Q9NXB0 RPL32P34-201ENST00000486380 400 ntBASIC3.85□□□□□ -1.79
MKS1Q9NXB0 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.85□□□□□ -1.79
MKS1Q9NXB0 RNU6-572P-201ENST00000516724 80 ntBASIC3.85□□□□□ -1.79
MKS1Q9NXB0 RNU6-703P-201ENST00000516946 107 ntBASIC3.85□□□□□ -1.79
MKS1Q9NXB0 AC105029.1-201ENST00000520250 669 ntBASIC3.85□□□□□ -1.79
MKS1Q9NXB0 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.85□□□□□ -1.79
MKS1Q9NXB0 HIGD1AP1-201ENST00000550979 275 ntBASIC3.85□□□□□ -1.79
MKS1Q9NXB0 AC011611.1-201ENST00000552179 197 ntBASIC3.85□□□□□ -1.79
MKS1Q9NXB0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.85□□□□□ -1.79
MKS1Q9NXB0 MIR3672-201ENST00000584290 82 ntBASIC3.85□□□□□ -1.79
MKS1Q9NXB0 FAM157A-202ENST00000615155 405 ntBASIC3.85□□□□□ -1.79
MKS1Q9NXB0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.85□□□□□ -1.79
MKS1Q9NXB0 MIR3653-201ENST00000625572 110 ntBASIC3.85□□□□□ -1.79
MKS1Q9NXB0 SNORA50A-202ENST00000629536 136 ntBASIC3.85□□□□□ -1.79
MKS1Q9NXB0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
MKS1Q9NXB0 U2.21-201ENST00000637295 81 ntBASIC3.85□□□□□ -1.79
MKS1Q9NXB0 AC112487.2-201ENST00000637950 304 ntBASIC3.85□□□□□ -1.79
MKS1Q9NXB0 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.85□□□□□ -1.79
MKS1Q9NXB0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.85□□□□□ -1.79
MKS1Q9NXB0 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
MKS1Q9NXB0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
MKS1Q9NXB0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.79
MKS1Q9NXB0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
MKS1Q9NXB0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
MKS1Q9NXB0 RNA5SP443-201ENST00000363083 132 ntBASIC3.84□□□□□ -1.79
MKS1Q9NXB0 RNU6-384P-201ENST00000364900 104 ntBASIC3.84□□□□□ -1.79
MKS1Q9NXB0 Y_RNA.324-201ENST00000365165 102 ntBASIC3.84□□□□□ -1.79
MKS1Q9NXB0 RNU6-166P-201ENST00000384371 107 ntBASIC3.84□□□□□ -1.79
MKS1Q9NXB0 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
MKS1Q9NXB0 AL022722.2-201ENST00000402519 180 ntBASIC3.84□□□□□ -1.79
MKS1Q9NXB0 Y_RNA.623-201ENST00000411128 95 ntBASIC3.84□□□□□ -1.79
MKS1Q9NXB0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.84□□□□□ -1.79
MKS1Q9NXB0 AC098614.2-201ENST00000426040 255 ntBASIC3.84□□□□□ -1.79
MKS1Q9NXB0 AC007560.1-201ENST00000426912 237 ntBASIC3.84□□□□□ -1.79
MKS1Q9NXB0 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.84□□□□□ -1.79
MKS1Q9NXB0 AC005019.1-201ENST00000436455 431 ntBASIC3.84□□□□□ -1.79
MKS1Q9NXB0 SSXP4-201ENST00000451349 245 ntBASIC3.84□□□□□ -1.79
MKS1Q9NXB0 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.84□□□□□ -1.79
MKS1Q9NXB0 AC092798.1-201ENST00000458542 409 ntBASIC3.84□□□□□ -1.79
MKS1Q9NXB0 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
MKS1Q9NXB0 Y_RNA.691-201ENST00000516611 103 ntBASIC3.84□□□□□ -1.79
MKS1Q9NXB0 RNU6-323P-201ENST00000521915 107 ntBASIC3.84□□□□□ -1.79
MKS1Q9NXB0 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.84□□□□□ -1.79
MKS1Q9NXB0 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
MKS1Q9NXB0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.84□□□□□ -1.79
MKS1Q9NXB0 AL355598.1-201ENST00000604169 202 ntBASIC3.84□□□□□ -1.79
MKS1Q9NXB0 AL132765.2-201ENST00000610812 351 ntBASIC3.84□□□□□ -1.79
MKS1Q9NXB0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
MKS1Q9NXB0 RMST_7.1-201ENST00000621935 268 ntBASIC3.84□□□□□ -1.79
MKS1Q9NXB0 AP000346.3-201ENST00000622821 210 ntBASIC3.84□□□□□ -1.79
MKS1Q9NXB0 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.84□□□□□ -1.79
MKS1Q9NXB0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
MKS1Q9NXB0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
MKS1Q9NXB0 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.84□□□□□ -1.8
MKS1Q9NXB0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms