Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AL359880.1-201ENST00000621879 266 ntBASIC3.38□□□□□ -1.87
DDX4Q9NQI0 SEPT14P19-203ENST00000633205 211 ntBASIC3.38□□□□□ -1.87
DDX4Q9NQI0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.38□□□□□ -1.87
DDX4Q9NQI0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
DDX4Q9NQI0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.38□□□□□ -1.87
DDX4Q9NQI0 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.38□□□□□ -1.87
DDX4Q9NQI0 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
DDX4Q9NQI0 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DDX4Q9NQI0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DDX4Q9NQI0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.37□□□□□ -1.87
DDX4Q9NQI0 RNU5E-6P-201ENST00000365574 115 ntBASIC3.37□□□□□ -1.87
DDX4Q9NQI0 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
DDX4Q9NQI0 SNORA46-201ENST00000384762 135 ntBASIC3.37□□□□□ -1.87
DDX4Q9NQI0 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
DDX4Q9NQI0 MTCO3P40-201ENST00000392516 676 ntBASIC3.37□□□□□ -1.87
DDX4Q9NQI0 FAT1P1-201ENST00000406588 507 ntBASIC3.37□□□□□ -1.87
DDX4Q9NQI0 UBE2V1P10-201ENST00000414685 269 ntBASIC3.37□□□□□ -1.87
DDX4Q9NQI0 RAC1P6-201ENST00000423911 575 ntBASIC3.37□□□□□ -1.87
DDX4Q9NQI0 AL356867.1-201ENST00000429623 299 ntBASIC3.37□□□□□ -1.87
DDX4Q9NQI0 SNRPGP6-201ENST00000451124 220 ntBASIC3.37□□□□□ -1.87
DDX4Q9NQI0 AC093899.1-201ENST00000457984 376 ntBASIC3.37□□□□□ -1.87
DDX4Q9NQI0 SNORD109B-201ENST00000458961 67 ntBASIC3.37□□□□□ -1.87
DDX4Q9NQI0 SNORD109A-201ENST00000459128 67 ntBASIC3.37□□□□□ -1.87
DDX4Q9NQI0 RPL23AP14-201ENST00000468281 468 ntBASIC3.37□□□□□ -1.87
DDX4Q9NQI0 AC104472.2-201ENST00000469035 601 ntBASIC3.37□□□□□ -1.87
DDX4Q9NQI0 RPS26P21-201ENST00000475397 348 ntBASIC3.37□□□□□ -1.87
DDX4Q9NQI0 RNU6-314P-201ENST00000516574 104 ntBASIC3.37□□□□□ -1.87
DDX4Q9NQI0 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.37□□□□□ -1.87
DDX4Q9NQI0 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
DDX4Q9NQI0 RPS3AP4-201ENST00000555161 764 ntBASIC3.37□□□□□ -1.87
DDX4Q9NQI0 AL355836.1-201ENST00000555951 870 ntBASIC3.37□□□□□ -1.87
DDX4Q9NQI0 AL359212.1-201ENST00000556608 614 ntBASIC3.37□□□□□ -1.87
DDX4Q9NQI0 TPRKBP2-201ENST00000565969 475 ntBASIC3.37□□□□□ -1.87
DDX4Q9NQI0 AC098848.2-201ENST00000588023 330 ntBASIC3.37□□□□□ -1.87
DDX4Q9NQI0 AL136363.1-201ENST00000605349 337 ntBASIC3.37□□□□□ -1.87
DDX4Q9NQI0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.37□□□□□ -1.87
DDX4Q9NQI0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
DDX4Q9NQI0 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DDX4Q9NQI0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
DDX4Q9NQI0 OR4G2P-201ENST00000328113 903 ntBASIC3.36□□□□□ -1.87
DDX4Q9NQI0 RNU6-960P-201ENST00000364056 120 ntBASIC3.36□□□□□ -1.87
DDX4Q9NQI0 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
DDX4Q9NQI0 RNU2-36P-201ENST00000410361 191 ntBASIC3.36□□□□□ -1.87
DDX4Q9NQI0 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX4Q9NQI0 EIF1P1-201ENST00000421436 341 ntBASIC3.36□□□□□ -1.87
DDX4Q9NQI0 AC018630.2-202ENST00000422992 927 ntBASIC3.36□□□□□ -1.87
DDX4Q9NQI0 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.36□□□□□ -1.87
DDX4Q9NQI0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX4Q9NQI0 USP9YP28-201ENST00000435142 589 ntBASIC3.36□□□□□ -1.87
DDX4Q9NQI0 MTATP6P13-201ENST00000438531 667 ntBASIC3.36□□□□□ -1.87
DDX4Q9NQI0 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX4Q9NQI0 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.36□□□□□ -1.87
DDX4Q9NQI0 RNA5SP310-201ENST00000459084 116 ntBASIC3.36□□□□□ -1.87
DDX4Q9NQI0 RN7SL429P-201ENST00000479090 223 ntBASIC3.36□□□□□ -1.87
DDX4Q9NQI0 RN7SL489P-201ENST00000486185 223 ntBASIC3.36□□□□□ -1.87
DDX4Q9NQI0 RN7SL327P-201ENST00000488659 223 ntBASIC3.36□□□□□ -1.87
DDX4Q9NQI0 SCARNA24.1-201ENST00000516465 137 ntBASIC3.36□□□□□ -1.87
DDX4Q9NQI0 RNU6-1092P-201ENST00000516955 87 ntBASIC3.36□□□□□ -1.87
DDX4Q9NQI0 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX4Q9NQI0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.36□□□□□ -1.87
DDX4Q9NQI0 ARL2BPP2-201ENST00000550907 489 ntBASIC3.36□□□□□ -1.87
DDX4Q9NQI0 AP005205.1-201ENST00000563503 508 ntBASIC3.36□□□□□ -1.87
DDX4Q9NQI0 AC010653.1-201ENST00000571108 881 ntBASIC3.36□□□□□ -1.87
DDX4Q9NQI0 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX4Q9NQI0 AC012507.3-201ENST00000603556 477 ntBASIC3.36□□□□□ -1.87
DDX4Q9NQI0 RN7SL853P-201ENST00000617250 223 ntBASIC3.36□□□□□ -1.87
DDX4Q9NQI0 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
DDX4Q9NQI0 AC005609.4-201ENST00000625071 447 ntBASIC3.36□□□□□ -1.87
DDX4Q9NQI0 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.36□□□□□ -1.87
DDX4Q9NQI0 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.36□□□□□ -1.87
DDX4Q9NQI0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.36□□□□□ -1.87
DDX4Q9NQI0 AC010733.2-201ENST00000589496 5702 ntBASIC3.36□□□□□ -1.87
DDX4Q9NQI0 AC103988.1-201ENST00000566382 2177 ntBASIC3.35□□□□□ -1.87
DDX4Q9NQI0 RNA5SP383-201ENST00000362934 120 ntBASIC3.35□□□□□ -1.87
DDX4Q9NQI0 RNU6-1120P-201ENST00000362988 108 ntBASIC3.35□□□□□ -1.87
DDX4Q9NQI0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
DDX4Q9NQI0 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
DDX4Q9NQI0 AC245054.2-201ENST00000415639 319 ntBASIC3.35□□□□□ -1.87
DDX4Q9NQI0 MTATP6P18-201ENST00000417994 673 ntBASIC3.35□□□□□ -1.87
DDX4Q9NQI0 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX4Q9NQI0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.35□□□□□ -1.87
DDX4Q9NQI0 AC063976.3-201ENST00000426849 329 ntBASIC3.35□□□□□ -1.87
DDX4Q9NQI0 MTCO2P19-201ENST00000427513 598 ntBASIC3.35□□□□□ -1.87
DDX4Q9NQI0 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX4Q9NQI0 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.35□□□□□ -1.87
DDX4Q9NQI0 GAPDHP27-201ENST00000447427 1020 ntBASIC3.35□□□□□ -1.87
DDX4Q9NQI0 MTND2P24-201ENST00000453434 806 ntBASIC3.35□□□□□ -1.87
DDX4Q9NQI0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX4Q9NQI0 RPS20P20-201ENST00000460498 340 ntBASIC3.35□□□□□ -1.87
DDX4Q9NQI0 RPL7P5-201ENST00000471472 736 ntBASIC3.35□□□□□ -1.87
DDX4Q9NQI0 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX4Q9NQI0 RNU6-1220P-201ENST00000517126 108 ntBASIC3.35□□□□□ -1.87
DDX4Q9NQI0 HMGB1P41-201ENST00000520234 440 ntBASIC3.35□□□□□ -1.87
DDX4Q9NQI0 OR4R1P-201ENST00000529879 463 ntBASIC3.35□□□□□ -1.87
DDX4Q9NQI0 AC055876.1-202ENST00000567053 138 ntBASIC3.35□□□□□ -1.87
DDX4Q9NQI0 AP001094.1-201ENST00000579805 193 ntBASIC3.35□□□□□ -1.87
DDX4Q9NQI0 AC107304.1-201ENST00000604229 296 ntBASIC3.35□□□□□ -1.87
DDX4Q9NQI0 AC126118.1-201ENST00000607744 628 ntBASIC3.35□□□□□ -1.87
DDX4Q9NQI0 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.35□□□□□ -1.87
DDX4Q9NQI0 AC017083.3-201ENST00000609955 700 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms