Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 Y_RNA.661-201ENST00000516003 99 ntBASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 RNU6-323P-201ENST00000521915 107 ntBASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 AC022790.1-201ENST00000522872 204 ntBASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 AL034351.1-201ENST00000605288 668 ntBASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 AL161423.1-201ENST00000613700 262 ntBASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 AL596275.2-204ENST00000641628 552 ntBASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 AL596275.2-206ENST00000641957 626 ntBASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
BCAS3Q9H6U6 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
BCAS3Q9H6U6 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
BCAS3Q9H6U6 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
BCAS3Q9H6U6 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
BCAS3Q9H6U6 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.72
BCAS3Q9H6U6 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.34□□□□□ -1.72
BCAS3Q9H6U6 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
BCAS3Q9H6U6 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 SNORA63.1-201ENST00000362493 131 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 RNU6-1155P-201ENST00000363554 107 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 Y_RNA.380-201ENST00000365663 111 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 RNU6-14P-201ENST00000384630 106 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 RNU6-817P-201ENST00000391083 104 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 MIR1250-201ENST00000408098 113 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 SNORA57.3-201ENST00000411095 141 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 RPL7AP73-201ENST00000413490 353 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 AC092447.6-201ENST00000414578 210 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 AC080125.1-201ENST00000414888 684 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 RPL21P109-201ENST00000422213 475 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 UBE2V1P4-201ENST00000425374 344 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 USP9YP16-201ENST00000430287 407 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 MRPS18BP2-201ENST00000434310 759 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 CYCSP43-201ENST00000438233 310 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 AC069285.2-201ENST00000440210 275 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 USP9YP23-201ENST00000455085 407 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 AC112492.4-201ENST00000456549 352 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 TBCAP3-201ENST00000512475 312 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 AC026801.2-201ENST00000515352 425 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 RNU6-1095P-201ENST00000516148 108 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 RNU6-635P-201ENST00000516651 102 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 SUB1P3-201ENST00000564581 315 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 MIR3922-201ENST00000585192 84 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 AL355297.3-201ENST00000604082 446 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 AC018889.1-201ENST00000605372 397 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 AC100812.1-201ENST00000607622 580 ntBASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.33□□□□□ -1.72
BCAS3Q9H6U6 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 RNA5SP97-201ENST00000365006 84 ntBASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 SNORA63.7-201ENST00000365579 123 ntBASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 SNORA5A-201ENST00000384111 134 ntBASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 RNU6-214P-201ENST00000384130 107 ntBASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 RNU6-190P-201ENST00000384154 102 ntBASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 Y_RNA.493-201ENST00000384422 102 ntBASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 SNORA68.2-201ENST00000391263 128 ntBASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 RNU6-55P-201ENST00000411092 107 ntBASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 YME1L1P1-201ENST00000429435 297 ntBASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 AC090774.1-201ENST00000435925 246 ntBASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 AC099799.1-201ENST00000439809 192 ntBASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 AL353748.1-201ENST00000440753 474 ntBASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 AL133162.1-201ENST00000463228 453 ntBASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 RN7SL271P-201ENST00000487601 295 ntBASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 RPL22P13-201ENST00000493291 347 ntBASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 RNU6-677P-201ENST00000516914 101 ntBASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 RN7SKP60-201ENST00000516985 239 ntBASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 GNRHR2P1-201ENST00000555315 631 ntBASIC4.32□□□□□ -1.72
BCAS3Q9H6U6 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms