Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 AL049874.1-201ENST00000489560 388 ntBASIC3.72□□□□□ -1.81
VPS16Q9H269 RPL38P4-201ENST00000502376 214 ntBASIC3.72□□□□□ -1.81
VPS16Q9H269 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.72□□□□□ -1.81
VPS16Q9H269 HSPD1P15-201ENST00000505573 1122 ntBASIC3.72□□□□□ -1.81
VPS16Q9H269 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.72□□□□□ -1.81
VPS16Q9H269 SNORA70.16-201ENST00000516390 95 ntBASIC3.72□□□□□ -1.81
VPS16Q9H269 AP005597.4-201ENST00000526762 229 ntBASIC3.72□□□□□ -1.81
VPS16Q9H269 OR4R1P-201ENST00000529879 463 ntBASIC3.72□□□□□ -1.81
VPS16Q9H269 AC087241.2-201ENST00000535801 324 ntBASIC3.72□□□□□ -1.81
VPS16Q9H269 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS16Q9H269 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS16Q9H269 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
VPS16Q9H269 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS16Q9H269 AC106900.2-201ENST00000604994 317 ntBASIC3.72□□□□□ -1.81
VPS16Q9H269 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS16Q9H269 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS16Q9H269 OR4G1P-203ENST00000641984 1631 ntBASIC3.72□□□□□ -1.81
VPS16Q9H269 MTND4P35-201ENST00000604257 1375 ntBASIC3.72□□□□□ -1.81
VPS16Q9H269 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS16Q9H269 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS16Q9H269 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS16Q9H269 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.71□□□□□ -1.81
VPS16Q9H269 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS16Q9H269 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VPS16Q9H269 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VPS16Q9H269 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS16Q9H269 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS16Q9H269 AL645937.1-202ENST00000421799 937 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 SAR1AP4-201ENST00000429225 591 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 ATP5JP1-201ENST00000431631 322 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 RPS20P5-201ENST00000434808 360 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 IFNA20P-201ENST00000436840 528 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS16Q9H269 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VPS16Q9H269 AC020550.1-201ENST00000447385 163 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 AC073415.1-201ENST00000449240 153 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 SNORD105B-201ENST00000458770 79 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS16Q9H269 AC025518.1-201ENST00000479856 347 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 AC096576.1-201ENST00000489014 359 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VPS16Q9H269 AC104619.4-201ENST00000510773 249 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 RN7SKP18-201ENST00000516005 275 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 SNORA19.2-201ENST00000516013 114 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 SCARNA15.2-201ENST00000516409 127 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 RNU6-1314P-201ENST00000517139 104 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 AP001804.3-201ENST00000525146 880 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 AC004024.1-201ENST00000549244 247 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
VPS16Q9H269 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS16Q9H269 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS16Q9H269 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS16Q9H269 AC005951.2-201ENST00000576282 495 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 MIR4742-201ENST00000581069 85 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.71□□□□□ -1.82
VPS16Q9H269 AL162730.1-201ENST00000605734 292 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 uc_338.5-201ENST00000611839 155 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
VPS16Q9H269 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS16Q9H269 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS16Q9H269 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VPS16Q9H269 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS16Q9H269 AC008568.2-201ENST00000623862 2313 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 ZNF285B-201ENST00000561698 1767 ntBASIC3.71□□□□□ -1.82
VPS16Q9H269 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS16Q9H269 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VPS16Q9H269 AC091152.2-201ENST00000591628 2569 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS16Q9H269 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS16Q9H269 AC017071.1-201ENST00000564407 2204 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.7□□□□□ -1.82
VPS16Q9H269 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS16Q9H269 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS16Q9H269 Y_RNA.22-201ENST00000362492 102 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 RNU6-996P-201ENST00000365438 107 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 RNU1-64P-201ENST00000365443 163 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 Y_RNA.367-201ENST00000365544 101 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 RNU4-20P-201ENST00000365601 151 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS16Q9H269 RNU6-606P-201ENST00000384721 111 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 NDUFS5P1-201ENST00000405668 289 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 RN7SKP202-201ENST00000410439 330 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 RNU2-39P-201ENST00000410604 198 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 AL513331.1-201ENST00000411908 397 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 MTND3P8-201ENST00000412909 339 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 BTF3L4P3-201ENST00000418879 476 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 MTCYBP8-201ENST00000422855 651 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 MTND2P23-201ENST00000422990 651 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 NDUFB4P7-201ENST00000423198 363 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 AL590383.1-201ENST00000428602 75 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 RPL36AP6-201ENST00000435770 321 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 HMGB3P11-201ENST00000440127 604 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS16Q9H269 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS16Q9H269 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.7□□□□□ -1.82
VPS16Q9H269 HMGN2P16-201ENST00000456802 261 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 AL163973.1-201ENST00000484753 577 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms