Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 RNU6-840P-201ENST00000517275 65 ntBASIC3.43□□□□□ -1.86
CDT1Q9H211 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.43□□□□□ -1.86
CDT1Q9H211 CENPUP1-201ENST00000526649 1202 ntBASIC3.43□□□□□ -1.86
CDT1Q9H211 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDT1Q9H211 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.43□□□□□ -1.86
CDT1Q9H211 AL359212.1-201ENST00000556608 614 ntBASIC3.43□□□□□ -1.86
CDT1Q9H211 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.43□□□□□ -1.86
CDT1Q9H211 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.43□□□□□ -1.86
CDT1Q9H211 MIR4513-201ENST00000581077 86 ntBASIC3.43□□□□□ -1.86
CDT1Q9H211 AC011471.1-201ENST00000585766 187 ntBASIC3.43□□□□□ -1.86
CDT1Q9H211 AL162413.1-201ENST00000603198 110 ntBASIC3.43□□□□□ -1.86
CDT1Q9H211 AC010133.1-201ENST00000615809 842 ntBASIC3.43□□□□□ -1.86
CDT1Q9H211 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.43□□□□□ -1.86
CDT1Q9H211 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.43□□□□□ -1.86
CDT1Q9H211 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.43□□□□□ -1.86
CDT1Q9H211 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.43□□□□□ -1.86
CDT1Q9H211 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CDT1Q9H211 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDT1Q9H211 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDT1Q9H211 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.42□□□□□ -1.86
CDT1Q9H211 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.42□□□□□ -1.86
CDT1Q9H211 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.42□□□□□ -1.86
CDT1Q9H211 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CDT1Q9H211 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.42□□□□□ -1.86
CDT1Q9H211 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.42□□□□□ -1.86
CDT1Q9H211 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
CDT1Q9H211 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.42□□□□□ -1.86
CDT1Q9H211 RPL7P26-201ENST00000333817 754 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDT1Q9H211 RNU6-188P-201ENST00000364207 107 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 RNU6-1322P-201ENST00000364309 107 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 DEFB109C-201ENST00000382575 264 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 DEFB109B-201ENST00000382656 264 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 MIR128-1-201ENST00000384921 82 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 SNORA48.2-201ENST00000390926 124 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 AL138878.1-201ENST00000405131 347 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.42□□□□□ -1.86
CDT1Q9H211 SDCBPP3-201ENST00000419629 891 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.42□□□□□ -1.86
CDT1Q9H211 AC008850.1-201ENST00000427546 362 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 RPS20P5-201ENST00000434808 360 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.42□□□□□ -1.86
CDT1Q9H211 RPS20P20-201ENST00000460498 340 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 AC004801.2-202ENST00000463559 283 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 AC083798.1-201ENST00000472671 131 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 RPS27AP1-201ENST00000475545 471 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 AC233702.1-201ENST00000482905 502 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 SNORA31.8-201ENST00000516327 108 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 PSMA2P1-201ENST00000526365 646 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 GLYCAM1-201ENST00000546596 285 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 AC093012.1-202ENST00000549403 582 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.42□□□□□ -1.86
CDT1Q9H211 MIR4325-201ENST00000583049 90 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 MIR4719-201ENST00000585233 84 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.42□□□□□ -1.86
CDT1Q9H211 SDR42E1P2-201ENST00000614861 481 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 AC024940.5-201ENST00000622889 474 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 SCARNA15.3-201ENST00000626315 122 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 SCARNA4.1-201ENST00000628597 123 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 AC099654.5-201ENST00000636479 350 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 MIR4275-201ENST00000636486 87 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 AC112487.2-201ENST00000637950 304 ntBASIC3.42□□□□□ -1.86
CDT1Q9H211 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDT1Q9H211 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CDT1Q9H211 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.42□□□□□ -1.86
CDT1Q9H211 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDT1Q9H211 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.42□□□□□ -1.86
CDT1Q9H211 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.41□□□□□ -1.86
CDT1Q9H211 AL353743.1-202ENST00000431724 1695 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 RNU5A-1-201ENST00000362698 116 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 RNU6-1120P-201ENST00000362988 108 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 SNORA54-201ENST00000384281 123 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 Y_RNA.509-201ENST00000384506 99 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 RNU6-606P-201ENST00000384721 111 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 SNORA48.5-201ENST00000391143 135 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 RNU6-1148P-201ENST00000410992 104 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 MRPL50P2-201ENST00000416821 482 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 MED13P1-201ENST00000428342 171 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 MTATP6P16-201ENST00000434543 526 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 MTND4LP16-201ENST00000440828 295 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 AC016691.1-201ENST00000441321 413 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.41□□□□□ -1.86
CDT1Q9H211 SNORD97-201ENST00000459187 142 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 HSPE1P6-201ENST00000479457 291 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.41□□□□□ -1.86
CDT1Q9H211 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDT1Q9H211 AC008885.1-201ENST00000514930 301 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 RNU1-61P-201ENST00000516107 151 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 RNU1-143P-201ENST00000516296 146 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 RNA5SP468-201ENST00000516782 93 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.41□□□□□ -1.86
CDT1Q9H211 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.41□□□□□ -1.86
CDT1Q9H211 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.41□□□□□ -1.86
CDT1Q9H211 AC005000.2-201ENST00000605468 310 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 U1.23-201ENST00000610293 146 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 RNU1-68P-201ENST00000615382 146 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 AC006504.8-201ENST00000621046 635 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 U1.39-201ENST00000621562 146 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 AC099506.2-201ENST00000623074 221 ntBASIC3.41□□□□□ -1.86
CDT1Q9H211 AP003122.6-201ENST00000623831 495 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms