Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 RPL32P28-201ENST00000443577 397 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 RANP8-201ENST00000444720 713 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 AL162151.2-201ENST00000448875 158 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 SNRPGP5-201ENST00000456003 220 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 RPL23AP31-201ENST00000456160 467 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 snoU13.4-201ENST00000458916 104 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 RPS15AP34-201ENST00000487776 387 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 TRBV12-2-201ENST00000489763 344 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 MTND5P5-201ENST00000503764 376 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 AC009901.1-201ENST00000506703 541 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 APOOP4-201ENST00000513530 597 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 RN7SKP83-201ENST00000516512 178 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 RANP9-201ENST00000519957 271 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 CYCSP27-201ENST00000527643 293 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 AP003072.1-201ENST00000531740 145 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 AC091516.1-201ENST00000549191 703 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 MED28P6-201ENST00000558776 231 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 AC093249.1-201ENST00000567049 203 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 AC138761.3-201ENST00000579993 334 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 MIR5692A1-201ENST00000580523 69 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 AC012119.1-201ENST00000603184 222 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 MIR6867-201ENST00000610636 67 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 AL138726.1-201ENST00000614873 333 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 AC090971.5-201ENST00000621102 293 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 AC093010.3-201ENST00000570269 15214 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 OR4G2P-202ENST00000641004 1759 ntBASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 MAPK10-373ENST00000641983 6772 ntBASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 RNA5SP130-201ENST00000364431 114 ntBASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 SNORA4.3-201ENST00000365564 137 ntBASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 SNORD116-29-201ENST00000384516 83 ntBASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 Y_RNA.534-201ENST00000384599 112 ntBASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 MIR3074-201ENST00000384885 81 ntBASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 RPL21P90-201ENST00000415692 466 ntBASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 USP9YP7-201ENST00000436723 430 ntBASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 TXNP1-201ENST00000441872 371 ntBASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 USP9YP32-201ENST00000452432 430 ntBASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 RPL7P49-201ENST00000471402 708 ntBASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 AC027575.1-201ENST00000481064 460 ntBASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 AL359273.1-201ENST00000510918 627 ntBASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 SNORA31.8-201ENST00000516327 108 ntBASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 AC087369.1-201ENST00000520775 996 ntBASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 COPS8P3-201ENST00000526024 482 ntBASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 MIR3921-201ENST00000577308 85 ntBASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 AC053481.4-201ENST00000583164 216 ntBASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 AC002545.1-201ENST00000592511 181 ntBASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 AC022432.1-201ENST00000595739 310 ntBASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 PART1_1.1-201ENST00000611761 217 ntBASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
AMBRA1Q9C0C7 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 AC032011.1-201ENST00000611703 1549 ntBASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 Y_RNA.162-201ENST00000363683 102 ntBASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 RNU6-692P-201ENST00000384496 107 ntBASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 AL391417.1-201ENST00000404100 426 ntBASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 TBCAP1-201ENST00000436520 327 ntBASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 RPS3AP12-201ENST00000443616 753 ntBASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 RPS29P31-201ENST00000446147 164 ntBASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 MTND1P17-201ENST00000448961 204 ntBASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 HMGB3P15-201ENST00000507326 574 ntBASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 AC008526.1-201ENST00000509149 338 ntBASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 RNU6-143P-201ENST00000516942 93 ntBASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.6□□□□□ -1.83
AMBRA1Q9C0C7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms