Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCM2Q9BSQ5 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 AC022336.2-201ENST00000568966 2538 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 SMIM11P1-201ENST00000369586 178 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 SNORD21-201ENST00000383953 95 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 SNORD116-9-201ENST00000384000 95 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 SNORD116-3-201ENST00000384287 95 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 SNORD116-1-201ENST00000384335 95 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 SNORD116-7-201ENST00000384404 95 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 SNORD116-5-201ENST00000384462 95 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 RNU6-297P-201ENST00000384636 107 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 RPS3AP36-201ENST00000398190 775 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 AL512633.1-201ENST00000399931 655 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 RNA5SP21-201ENST00000410917 96 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 AL592148.1-201ENST00000413568 445 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 GPM6BP2-201ENST00000432046 144 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 MTCO2P16-201ENST00000436962 677 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 AC025750.2-201ENST00000442609 450 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 GPM6BP1-201ENST00000446387 144 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 GAPDHP17-201ENST00000449858 1001 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 RPL23AP11-201ENST00000475260 469 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 RAP1BP2-201ENST00000478270 544 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 AC103975.1-201ENST00000482506 483 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 AC096576.1-201ENST00000489014 359 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 RPPH1-2P-201ENST00000516688 293 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 SNORA18.6-201ENST00000516792 115 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 RPS3AP4-201ENST00000555161 764 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 GTF3AP2-201ENST00000557014 266 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 AL161798.1-201ENST00000604630 131 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 MTND4LP5-201ENST00000605152 292 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 PISRT1-201ENST00000626175 531 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.7□□□□□ -1.98
CCM2Q9BSQ5 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 HSPE1P11-201ENST00000339579 310 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 Y_RNA.77-201ENST00000362962 107 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 RNU6-884P-201ENST00000363889 107 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 RNU1-112P-201ENST00000364401 164 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 RNU6-39P-201ENST00000384344 107 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 RNU6-14P-201ENST00000384630 106 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 RPL17P50-201ENST00000396131 546 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 ELOCP14-201ENST00000428070 331 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 SNRPEP9-201ENST00000436794 238 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 ELOCP7-201ENST00000439968 331 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 USP9YP29-201ENST00000445112 563 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 RNU6-953P-201ENST00000459154 107 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 AC093534.1-201ENST00000504977 132 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 SNORA31.3-201ENST00000516029 96 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 Vault.3-201ENST00000516676 95 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 RNA5SP165-201ENST00000517142 115 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 AC079600.2-201ENST00000550076 130 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 AC023043.3-201ENST00000593113 385 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 RPL12P50-201ENST00000603116 116 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 AC104763.2-201ENST00000604179 382 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 AL033523.1-201ENST00000605153 153 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 AL451064.1-201ENST00000607718 471 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 AC107294.1-201ENST00000609524 467 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 AC007998.5-201ENST00000622938 237 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 MTND5P29-201ENST00000458676 1807 ntBASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.69□□□□□ -1.98
CCM2Q9BSQ5 RNU6-960P-201ENST00000364056 120 ntBASIC2.68□□□□□ -1.98
CCM2Q9BSQ5 MIR23A-201ENST00000385245 73 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms