Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 RNU6-143P-201ENST00000516942 93 ntBASIC3.23□□□□□ -1.89
SDF4Q9BRK5 SNORA31.26-201ENST00000517250 137 ntBASIC3.23□□□□□ -1.89
SDF4Q9BRK5 AC090136.1-201ENST00000520009 240 ntBASIC3.23□□□□□ -1.89
SDF4Q9BRK5 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.23□□□□□ -1.89
SDF4Q9BRK5 HPRT1P3-201ENST00000539521 576 ntBASIC3.23□□□□□ -1.89
SDF4Q9BRK5 GTF3AP2-201ENST00000557014 266 ntBASIC3.23□□□□□ -1.89
SDF4Q9BRK5 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.23□□□□□ -1.89
SDF4Q9BRK5 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.23□□□□□ -1.89
SDF4Q9BRK5 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.23□□□□□ -1.89
SDF4Q9BRK5 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.23□□□□□ -1.89
SDF4Q9BRK5 AC023043.3-201ENST00000593113 385 ntBASIC3.23□□□□□ -1.89
SDF4Q9BRK5 AC069234.5-201ENST00000611056 416 ntBASIC3.23□□□□□ -1.89
SDF4Q9BRK5 AC131902.3-201ENST00000611767 581 ntBASIC3.23□□□□□ -1.89
SDF4Q9BRK5 PISRT1-201ENST00000626175 531 ntBASIC3.23□□□□□ -1.89
SDF4Q9BRK5 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.23□□□□□ -1.89
SDF4Q9BRK5 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
SDF4Q9BRK5 AC092593.1-201ENST00000515413 1815 ntBASIC3.22□□□□□ -1.89
SDF4Q9BRK5 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.22□□□□□ -1.89
SDF4Q9BRK5 Y_RNA.534-201ENST00000384599 112 ntBASIC3.22□□□□□ -1.89
SDF4Q9BRK5 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.22□□□□□ -1.89
SDF4Q9BRK5 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.22□□□□□ -1.89
SDF4Q9BRK5 AL592045.1-201ENST00000429867 352 ntBASIC3.22□□□□□ -1.89
SDF4Q9BRK5 AL591704.1-201ENST00000432574 275 ntBASIC3.22□□□□□ -1.89
SDF4Q9BRK5 AC087499.2-201ENST00000432861 149 ntBASIC3.22□□□□□ -1.89
SDF4Q9BRK5 AC098826.1-201ENST00000433943 471 ntBASIC3.22□□□□□ -1.89
SDF4Q9BRK5 AC009961.2-201ENST00000435771 251 ntBASIC3.22□□□□□ -1.89
SDF4Q9BRK5 RPS24P1-201ENST00000438550 371 ntBASIC3.22□□□□□ -1.89
SDF4Q9BRK5 AC105272.1-201ENST00000438604 198 ntBASIC3.22□□□□□ -1.89
SDF4Q9BRK5 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.22□□□□□ -1.89
SDF4Q9BRK5 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.22□□□□□ -1.89
SDF4Q9BRK5 RPL31P41-201ENST00000477967 372 ntBASIC3.22□□□□□ -1.89
SDF4Q9BRK5 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.22□□□□□ -1.89
SDF4Q9BRK5 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.22□□□□□ -1.89
SDF4Q9BRK5 MTND2P38-201ENST00000522536 667 ntBASIC3.22□□□□□ -1.89
SDF4Q9BRK5 AC022616.3-201ENST00000523940 148 ntBASIC3.22□□□□□ -1.89
SDF4Q9BRK5 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.22□□□□□ -1.89
SDF4Q9BRK5 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.22□□□□□ -1.89
SDF4Q9BRK5 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.22□□□□□ -1.89
SDF4Q9BRK5 AC010546.1-201ENST00000569391 485 ntBASIC3.22□□□□□ -1.89
SDF4Q9BRK5 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.22□□□□□ -1.89
SDF4Q9BRK5 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.22□□□□□ -1.89
SDF4Q9BRK5 AC022893.3-201ENST00000607665 437 ntBASIC3.22□□□□□ -1.89
SDF4Q9BRK5 AC013562.2-201ENST00000611632 603 ntBASIC3.22□□□□□ -1.89
SDF4Q9BRK5 AC008250.2-201ENST00000615261 205 ntBASIC3.22□□□□□ -1.89
SDF4Q9BRK5 AC138915.1-201ENST00000565427 1685 ntBASIC3.22□□□□□ -1.89
SDF4Q9BRK5 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SDF4Q9BRK5 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SDF4Q9BRK5 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.22□□□□□ -1.89
SDF4Q9BRK5 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.21□□□□□ -1.9
SDF4Q9BRK5 FARSBP1-201ENST00000435808 1778 ntBASIC3.21□□□□□ -1.9
SDF4Q9BRK5 NACAP2-201ENST00000318548 624 ntBASIC3.21□□□□□ -1.9
SDF4Q9BRK5 RNU6-39P-201ENST00000384344 107 ntBASIC3.21□□□□□ -1.9
SDF4Q9BRK5 MIR558-201ENST00000384920 94 ntBASIC3.21□□□□□ -1.9
SDF4Q9BRK5 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.21□□□□□ -1.9
SDF4Q9BRK5 AL031121.1-201ENST00000406553 254 ntBASIC3.21□□□□□ -1.9
SDF4Q9BRK5 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.21□□□□□ -1.9
SDF4Q9BRK5 AC009518.2-201ENST00000418056 731 ntBASIC3.21□□□□□ -1.9
SDF4Q9BRK5 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.21□□□□□ -1.9
SDF4Q9BRK5 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.21□□□□□ -1.9
SDF4Q9BRK5 RPL7P37-201ENST00000425095 738 ntBASIC3.21□□□□□ -1.9
SDF4Q9BRK5 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.21□□□□□ -1.9
SDF4Q9BRK5 MED13P1-201ENST00000428342 171 ntBASIC3.21□□□□□ -1.9
SDF4Q9BRK5 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.21□□□□□ -1.9
SDF4Q9BRK5 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SDF4Q9BRK5 AL591212.2-201ENST00000433923 257 ntBASIC3.21□□□□□ -1.9
SDF4Q9BRK5 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.21□□□□□ -1.9
SDF4Q9BRK5 AL136380.1-201ENST00000447970 162 ntBASIC3.21□□□□□ -1.9
SDF4Q9BRK5 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.21□□□□□ -1.9
SDF4Q9BRK5 AC103975.1-201ENST00000482506 483 ntBASIC3.21□□□□□ -1.9
SDF4Q9BRK5 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.21□□□□□ -1.9
SDF4Q9BRK5 RNA5SP76-201ENST00000516277 87 ntBASIC3.21□□□□□ -1.9
SDF4Q9BRK5 SNORA9.3-201ENST00000516383 129 ntBASIC3.21□□□□□ -1.9
SDF4Q9BRK5 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.21□□□□□ -1.9
SDF4Q9BRK5 AP003122.3-201ENST00000526316 255 ntBASIC3.21□□□□□ -1.9
SDF4Q9BRK5 AC084851.1-201ENST00000529105 249 ntBASIC3.21□□□□□ -1.9
SDF4Q9BRK5 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.21□□□□□ -1.9
SDF4Q9BRK5 CLIC4P2-201ENST00000601934 717 ntBASIC3.21□□□□□ -1.9
SDF4Q9BRK5 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SDF4Q9BRK5 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SDF4Q9BRK5 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SDF4Q9BRK5 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SDF4Q9BRK5 RNY1P12-201ENST00000364251 105 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 SNORA20.2-201ENST00000383922 131 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 RNU6-297P-201ENST00000384636 107 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 MIR301A-201ENST00000385261 86 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 RNU6-750P-201ENST00000390946 107 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 AC127391.1-201ENST00000411737 98 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 AC096649.2-201ENST00000416186 393 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 AL109913.1-201ENST00000421173 514 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.2□□□□□ -1.9
SDF4Q9BRK5 AC104850.1-201ENST00000435940 476 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.2□□□□□ -1.9
SDF4Q9BRK5 AL022238.1-201ENST00000442557 355 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 ST13P20-201ENST00000447996 1065 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 GAPDHP17-201ENST00000449858 1001 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.2□□□□□ -1.9
SDF4Q9BRK5 AC093899.1-201ENST00000457984 376 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 SEM1P1-201ENST00000506694 209 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.2□□□□□ -1.9
SDF4Q9BRK5 Vault.3-201ENST00000516676 95 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms