Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 SETP6-201ENST00000479329 568 ntBASIC0.91□□□□□ -2.26
VPS25Q9BRG1 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.91□□□□□ -2.26
VPS25Q9BRG1 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.91□□□□□ -2.26
VPS25Q9BRG1 AC090821.2-201ENST00000523552 176 ntBASIC0.91□□□□□ -2.26
VPS25Q9BRG1 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC0.91□□□□□ -2.26
VPS25Q9BRG1 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC0.91□□□□□ -2.26
VPS25Q9BRG1 AK6P1-201ENST00000540219 478 ntBASIC0.91□□□□□ -2.26
VPS25Q9BRG1 AC090502.2-201ENST00000549267 280 ntBASIC0.91□□□□□ -2.26
VPS25Q9BRG1 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC0.91□□□□□ -2.26
VPS25Q9BRG1 AC110588.1-201ENST00000559699 137 ntBASIC0.91□□□□□ -2.26
VPS25Q9BRG1 ROCK1P1-201ENST00000573767 549 ntBASIC0.91□□□□□ -2.26
VPS25Q9BRG1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.91□□□□□ -2.26
VPS25Q9BRG1 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.91□□□□□ -2.26
VPS25Q9BRG1 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.91□□□□□ -2.26
VPS25Q9BRG1 AL713866.2-201ENST00000603579 219 ntBASIC0.91□□□□□ -2.26
VPS25Q9BRG1 AL033523.1-201ENST00000605153 153 ntBASIC0.91□□□□□ -2.26
VPS25Q9BRG1 AC093673.2-201ENST00000609674 331 ntBASIC0.91□□□□□ -2.26
VPS25Q9BRG1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC0.91□□□□□ -2.26
VPS25Q9BRG1 MIR8081-201ENST00000611533 95 ntBASIC0.91□□□□□ -2.26
VPS25Q9BRG1 AC090517.3-201ENST00000625170 141 ntBASIC0.91□□□□□ -2.26
VPS25Q9BRG1 TEX21P-201ENST00000447107 1476 ntBASIC0.91□□□□□ -2.26
VPS25Q9BRG1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.91□□□□□ -2.26
VPS25Q9BRG1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC0.91□□□□□ -2.26
VPS25Q9BRG1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.9□□□□□ -2.26
VPS25Q9BRG1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
VPS25Q9BRG1 ATP8A2P3-201ENST00000426792 1536 ntBASIC0.9□□□□□ -2.26
VPS25Q9BRG1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC0.9□□□□□ -2.26
VPS25Q9BRG1 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
VPS25Q9BRG1 RNU5E-1-201ENST00000362477 120 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 RNU5E-8P-201ENST00000363502 116 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 RNU6-1187P-201ENST00000364771 110 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
VPS25Q9BRG1 RNU6-253P-201ENST00000384730 105 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 MIR583-201ENST00000384846 75 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 MIR597-201ENST00000384968 97 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
VPS25Q9BRG1 RNU6-796P-201ENST00000391086 107 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 RNU11-3P-201ENST00000391111 133 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 SNORA40.18-201ENST00000391200 128 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 RPL23AP36-201ENST00000413895 458 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC0.9□□□□□ -2.27
VPS25Q9BRG1 DPH3P2-201ENST00000422618 250 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.9□□□□□ -2.27
VPS25Q9BRG1 RAC1P8-201ENST00000427086 527 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 MTCYBP32-201ENST00000427945 1084 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC0.9□□□□□ -2.27
VPS25Q9BRG1 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC0.9□□□□□ -2.27
VPS25Q9BRG1 AC002381.1-201ENST00000447049 280 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.9□□□□□ -2.27
VPS25Q9BRG1 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.9□□□□□ -2.27
VPS25Q9BRG1 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.9□□□□□ -2.27
VPS25Q9BRG1 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC0.9□□□□□ -2.27
VPS25Q9BRG1 AL121594.1-201ENST00000475906 575 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 AC004924.1-201ENST00000480160 781 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC0.9□□□□□ -2.27
VPS25Q9BRG1 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.9□□□□□ -2.27
VPS25Q9BRG1 RNU6-760P-201ENST00000516078 97 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 AP003122.4-201ENST00000530980 758 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.9□□□□□ -2.27
VPS25Q9BRG1 AC090079.2-201ENST00000575289 768 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC0.9□□□□□ -2.27
VPS25Q9BRG1 ELOCP5-201ENST00000604924 333 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 AL160281.1-201ENST00000605307 311 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 AC008121.3-201ENST00000618726 433 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 AL109620.1-201ENST00000618738 1197 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 AL163051.2-201ENST00000618976 735 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 AL121890.5-201ENST00000620848 304 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 MIR4275-201ENST00000636486 87 ntBASIC0.9□□□□□ -2.27
VPS25Q9BRG1 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.9□□□□□ -2.27
VPS25Q9BRG1 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.9□□□□□ -2.27
VPS25Q9BRG1 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
VPS25Q9BRG1 RNU6-271P-201ENST00000363858 105 ntBASIC0.89□□□□□ -2.27
VPS25Q9BRG1 SNORA80A-201ENST00000363922 136 ntBASIC0.89□□□□□ -2.27
VPS25Q9BRG1 USP9YP10-201ENST00000454868 628 ntBASIC0.89□□□□□ -2.27
VPS25Q9BRG1 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
VPS25Q9BRG1 MTCO3P42-201ENST00000509488 518 ntBASIC0.89□□□□□ -2.27
VPS25Q9BRG1 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC0.89□□□□□ -2.27
VPS25Q9BRG1 AC048346.1-201ENST00000510247 144 ntBASIC0.89□□□□□ -2.27
VPS25Q9BRG1 MTCO3P39-201ENST00000514812 518 ntBASIC0.89□□□□□ -2.27
VPS25Q9BRG1 AP005660.1-201ENST00000522972 293 ntBASIC0.89□□□□□ -2.27
VPS25Q9BRG1 CYCSP27-201ENST00000527643 293 ntBASIC0.89□□□□□ -2.27
VPS25Q9BRG1 MTCO2P15-201ENST00000532655 656 ntBASIC0.89□□□□□ -2.27
VPS25Q9BRG1 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.89□□□□□ -2.27
VPS25Q9BRG1 AC125611.1-201ENST00000549563 229 ntBASIC0.89□□□□□ -2.27
VPS25Q9BRG1 EIF1AXP2-201ENST00000555940 413 ntBASIC0.89□□□□□ -2.27
VPS25Q9BRG1 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.89□□□□□ -2.27
VPS25Q9BRG1 AC095057.3-201ENST00000567102 1157 ntBASIC0.89□□□□□ -2.27
VPS25Q9BRG1 AC106734.1-201ENST00000568646 663 ntBASIC0.89□□□□□ -2.27
VPS25Q9BRG1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC0.89□□□□□ -2.27
VPS25Q9BRG1 MIR4444-1-201ENST00000581696 74 ntBASIC0.89□□□□□ -2.27
VPS25Q9BRG1 MIR4444-2-201ENST00000584390 74 ntBASIC0.89□□□□□ -2.27
VPS25Q9BRG1 AC004853.1-201ENST00000604902 698 ntBASIC0.89□□□□□ -2.27
VPS25Q9BRG1 AL355802.3-201ENST00000607571 545 ntBASIC0.89□□□□□ -2.27
VPS25Q9BRG1 AL136981.2-201ENST00000617319 734 ntBASIC0.89□□□□□ -2.27
VPS25Q9BRG1 AC020763.5-201ENST00000623298 430 ntBASIC0.89□□□□□ -2.27
VPS25Q9BRG1 AC091965.5-201ENST00000624785 342 ntBASIC0.89□□□□□ -2.27
VPS25Q9BRG1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.89□□□□□ -2.27
VPS25Q9BRG1 UBE2L2-201ENST00000254302 429 ntBASIC0.88□□□□□ -2.27
VPS25Q9BRG1 RNA5SP88-201ENST00000365560 109 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms