Protein–RNA interactions for Protein: Q9BQS8

FYCO1, FYVE and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1Q9BQS8 AC005021.1-201ENST00000608730 355 ntBASIC1.22□□□□□ -2.21
FYCO1Q9BQS8 AC096772.1-201ENST00000609146 564 ntBASIC1.22□□□□□ -2.21
FYCO1Q9BQS8 TPTE2P4-201ENST00000258589 1605 ntBASIC1.21□□□□□ -2.22
FYCO1Q9BQS8 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.21□□□□□ -2.22
FYCO1Q9BQS8 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.21□□□□□ -2.22
FYCO1Q9BQS8 MTATP6P31-201ENST00000406985 692 ntBASIC1.21□□□□□ -2.22
FYCO1Q9BQS8 RNU6-1328P-201ENST00000410938 106 ntBASIC1.21□□□□□ -2.22
FYCO1Q9BQS8 SFR1P2-201ENST00000421841 730 ntBASIC1.21□□□□□ -2.22
FYCO1Q9BQS8 snoU109.1-201ENST00000459339 135 ntBASIC1.21□□□□□ -2.22
FYCO1Q9BQS8 AC243960.4-201ENST00000600532 288 ntBASIC1.21□□□□□ -2.22
FYCO1Q9BQS8 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
FYCO1Q9BQS8 RNU6-1197P-201ENST00000391183 107 ntBASIC1.2□□□□□ -2.22
FYCO1Q9BQS8 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.2□□□□□ -2.22
FYCO1Q9BQS8 UBE2FP1-201ENST00000416536 447 ntBASIC1.2□□□□□ -2.22
FYCO1Q9BQS8 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.2□□□□□ -2.22
FYCO1Q9BQS8 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.2□□□□□ -2.22
FYCO1Q9BQS8 OR6C72P-201ENST00000451403 892 ntBASIC1.2□□□□□ -2.22
FYCO1Q9BQS8 RNU7-23P-201ENST00000459465 62 ntBASIC1.2□□□□□ -2.22
FYCO1Q9BQS8 RRN3P3-201ENST00000549207 578 ntBASIC1.2□□□□□ -2.22
FYCO1Q9BQS8 AC011260.1-201ENST00000578420 472 ntBASIC1.2□□□□□ -2.22
FYCO1Q9BQS8 AC105245.1-201ENST00000581934 244 ntBASIC1.2□□□□□ -2.22
FYCO1Q9BQS8 AP003399.1-201ENST00000637534 361 ntBASIC1.2□□□□□ -2.22
FYCO1Q9BQS8 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.19□□□□□ -2.22
FYCO1Q9BQS8 RNU6-939P-201ENST00000384634 107 ntBASIC1.19□□□□□ -2.22
FYCO1Q9BQS8 RNU6-882P-201ENST00000391025 103 ntBASIC1.19□□□□□ -2.22
FYCO1Q9BQS8 FGF7P5-201ENST00000441829 291 ntBASIC1.19□□□□□ -2.22
FYCO1Q9BQS8 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC1.19□□□□□ -2.22
FYCO1Q9BQS8 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.19□□□□□ -2.22
FYCO1Q9BQS8 AC018437.1-201ENST00000492214 406 ntBASIC1.19□□□□□ -2.22
FYCO1Q9BQS8 AC008562.1-201ENST00000521763 330 ntBASIC1.19□□□□□ -2.22
FYCO1Q9BQS8 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.19□□□□□ -2.22
FYCO1Q9BQS8 HMGB1P14-201ENST00000557424 591 ntBASIC1.19□□□□□ -2.22
FYCO1Q9BQS8 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.19□□□□□ -2.22
FYCO1Q9BQS8 AP002791.1-201ENST00000623291 381 ntBASIC1.19□□□□□ -2.22
FYCO1Q9BQS8 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.19□□□□□ -2.22
FYCO1Q9BQS8 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
FYCO1Q9BQS8 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
FYCO1Q9BQS8 AL109913.1-201ENST00000421173 514 ntBASIC1.18□□□□□ -2.22
FYCO1Q9BQS8 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.18□□□□□ -2.22
FYCO1Q9BQS8 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.18□□□□□ -2.22
FYCO1Q9BQS8 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.18□□□□□ -2.22
FYCO1Q9BQS8 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
FYCO1Q9BQS8 RNU6-351P-201ENST00000516097 100 ntBASIC1.18□□□□□ -2.22
FYCO1Q9BQS8 LINC00933-203ENST00000559812 219 ntBASIC1.18□□□□□ -2.22
FYCO1Q9BQS8 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.18□□□□□ -2.22
FYCO1Q9BQS8 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
FYCO1Q9BQS8 AC008163.1-202ENST00000636004 2889 ntBASIC1.18□□□□□ -2.22
FYCO1Q9BQS8 SNORD114-23-201ENST00000363536 72 ntBASIC1.18□□□□□ -2.22
FYCO1Q9BQS8 RNU6-712P-201ENST00000410558 100 ntBASIC1.18□□□□□ -2.22
FYCO1Q9BQS8 RNU6-516P-201ENST00000411381 104 ntBASIC1.18□□□□□ -2.22
FYCO1Q9BQS8 HMGN1P33-201ENST00000432945 451 ntBASIC1.18□□□□□ -2.22
FYCO1Q9BQS8 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.18□□□□□ -2.22
FYCO1Q9BQS8 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.18□□□□□ -2.22
FYCO1Q9BQS8 AC008127.2-201ENST00000549925 1075 ntBASIC1.18□□□□□ -2.22
FYCO1Q9BQS8 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.18□□□□□ -2.22
FYCO1Q9BQS8 AP001485.1-201ENST00000604799 199 ntBASIC1.18□□□□□ -2.22
FYCO1Q9BQS8 AL592148.2-201ENST00000612210 372 ntBASIC1.18□□□□□ -2.22
FYCO1Q9BQS8 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.18□□□□□ -2.22
FYCO1Q9BQS8 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.17□□□□□ -2.22
FYCO1Q9BQS8 RNU4-23P-201ENST00000362839 140 ntBASIC1.17□□□□□ -2.22
FYCO1Q9BQS8 RNU6-270P-201ENST00000364131 105 ntBASIC1.17□□□□□ -2.22
FYCO1Q9BQS8 BTF3L4P2-201ENST00000392798 346 ntBASIC1.17□□□□□ -2.22
FYCO1Q9BQS8 RN7SKP61-201ENST00000410642 295 ntBASIC1.17□□□□□ -2.22
FYCO1Q9BQS8 AC099677.1-201ENST00000420575 175 ntBASIC1.17□□□□□ -2.22
FYCO1Q9BQS8 AC093106.2-201ENST00000428212 385 ntBASIC1.17□□□□□ -2.22
FYCO1Q9BQS8 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.17□□□□□ -2.22
FYCO1Q9BQS8 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.17□□□□□ -2.22
FYCO1Q9BQS8 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
FYCO1Q9BQS8 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.17□□□□□ -2.22
FYCO1Q9BQS8 SNORA48.10-201ENST00000516965 160 ntBASIC1.17□□□□□ -2.22
FYCO1Q9BQS8 SCARNA11.3-201ENST00000517276 130 ntBASIC1.17□□□□□ -2.22
FYCO1Q9BQS8 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.17□□□□□ -2.22
FYCO1Q9BQS8 AC010186.2-204ENST00000537668 439 ntBASIC1.17□□□□□ -2.22
FYCO1Q9BQS8 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.17□□□□□ -2.22
FYCO1Q9BQS8 AC092470.1-201ENST00000546187 132 ntBASIC1.17□□□□□ -2.22
FYCO1Q9BQS8 AC087465.1-201ENST00000560574 245 ntBASIC1.17□□□□□ -2.22
FYCO1Q9BQS8 AL031274.2-201ENST00000599419 203 ntBASIC1.17□□□□□ -2.22
FYCO1Q9BQS8 AP002826.1-201ENST00000608835 315 ntBASIC1.17□□□□□ -2.22
FYCO1Q9BQS8 AC010487.4-201ENST00000637027 61 ntBASIC1.17□□□□□ -2.22
FYCO1Q9BQS8 RNU6-989P-201ENST00000362756 107 ntBASIC1.16□□□□□ -2.22
FYCO1Q9BQS8 RNU6-173P-201ENST00000364215 104 ntBASIC1.16□□□□□ -2.22
FYCO1Q9BQS8 RNU6-452P-201ENST00000384406 107 ntBASIC1.16□□□□□ -2.22
FYCO1Q9BQS8 AL136372.1-201ENST00000403060 228 ntBASIC1.16□□□□□ -2.22
FYCO1Q9BQS8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.16□□□□□ -2.22
FYCO1Q9BQS8 CR848007.2-201ENST00000424918 787 ntBASIC1.16□□□□□ -2.22
FYCO1Q9BQS8 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.16□□□□□ -2.22
FYCO1Q9BQS8 AL691517.1-201ENST00000440833 1235 ntBASIC1.16□□□□□ -2.22
FYCO1Q9BQS8 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.16□□□□□ -2.22
FYCO1Q9BQS8 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
FYCO1Q9BQS8 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.16□□□□□ -2.22
FYCO1Q9BQS8 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.16□□□□□ -2.22
FYCO1Q9BQS8 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.16□□□□□ -2.22
FYCO1Q9BQS8 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.16□□□□□ -2.22
FYCO1Q9BQS8 AC010329.5-201ENST00000623497 2174 ntBASIC1.16□□□□□ -2.22
FYCO1Q9BQS8 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.15□□□□□ -2.22
FYCO1Q9BQS8 AC016716.1-201ENST00000265882 708 ntBASIC1.15□□□□□ -2.23
FYCO1Q9BQS8 Y_RNA.251-201ENST00000364551 99 ntBASIC1.15□□□□□ -2.23
FYCO1Q9BQS8 MIR934-201ENST00000401241 83 ntBASIC1.15□□□□□ -2.23
FYCO1Q9BQS8 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.15□□□□□ -2.23
FYCO1Q9BQS8 RNU6-420P-201ENST00000458780 107 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms