Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.86□□□□□ -2.11
VAT1Q99536 SNORD114-1-201ENST00000362705 72 ntBASIC1.86□□□□□ -2.11
VAT1Q99536 MIR17-201ENST00000385012 84 ntBASIC1.86□□□□□ -2.11
VAT1Q99536 RNU6-1140P-201ENST00000410517 106 ntBASIC1.86□□□□□ -2.11
VAT1Q99536 RPL26P27-201ENST00000414397 437 ntBASIC1.86□□□□□ -2.11
VAT1Q99536 USP9YP26-201ENST00000421008 661 ntBASIC1.86□□□□□ -2.11
VAT1Q99536 AL445685.2-201ENST00000422551 342 ntBASIC1.86□□□□□ -2.11
VAT1Q99536 AL953862.1-201ENST00000423016 168 ntBASIC1.86□□□□□ -2.11
VAT1Q99536 EIF4EP4-201ENST00000424916 578 ntBASIC1.86□□□□□ -2.11
VAT1Q99536 HMGN2P19-201ENST00000425149 265 ntBASIC1.86□□□□□ -2.11
VAT1Q99536 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.86□□□□□ -2.11
VAT1Q99536 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.86□□□□□ -2.11
VAT1Q99536 TPT1P14-201ENST00000448018 505 ntBASIC1.86□□□□□ -2.11
VAT1Q99536 HMGN2P10-201ENST00000448085 265 ntBASIC1.86□□□□□ -2.11
VAT1Q99536 RNA5SP233-201ENST00000459153 113 ntBASIC1.86□□□□□ -2.11
VAT1Q99536 AC024589.1-201ENST00000512207 263 ntBASIC1.86□□□□□ -2.11
VAT1Q99536 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.86□□□□□ -2.11
VAT1Q99536 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
VAT1Q99536 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.86□□□□□ -2.11
VAT1Q99536 AC092451.2-201ENST00000538746 658 ntBASIC1.86□□□□□ -2.11
VAT1Q99536 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.86□□□□□ -2.11
VAT1Q99536 MTND4LP25-201ENST00000570218 163 ntBASIC1.86□□□□□ -2.11
VAT1Q99536 UBE2L4-201ENST00000587688 464 ntBASIC1.86□□□□□ -2.11
VAT1Q99536 AC008749.1-201ENST00000597650 306 ntBASIC1.86□□□□□ -2.11
VAT1Q99536 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.86□□□□□ -2.11
VAT1Q99536 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.86□□□□□ -2.11
VAT1Q99536 AL158801.5-201ENST00000623123 465 ntBASIC1.86□□□□□ -2.11
VAT1Q99536 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
VAT1Q99536 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
VAT1Q99536 RNU6-1167P-201ENST00000363227 94 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 RNA5SP126-201ENST00000365092 109 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 U6atac.2-201ENST00000408644 118 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 RNU2-40P-201ENST00000410833 196 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 AC069282.1-201ENST00000411911 526 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.85□□□□□ -2.11
VAT1Q99536 BX276092.3-201ENST00000424182 230 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 RPS3AP44-201ENST00000425466 790 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 FABP5P14-201ENST00000437273 393 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 MTCO2P25-201ENST00000447065 681 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 PSPHP1-201ENST00000450062 261 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.85□□□□□ -2.11
VAT1Q99536 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.85□□□□□ -2.11
VAT1Q99536 MEMO1P3-201ENST00000459811 302 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 AC008481.1-201ENST00000463278 396 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 AC010631.1-201ENST00000474150 156 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
VAT1Q99536 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
VAT1Q99536 MIR892C-201ENST00000516410 77 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 SNORD19.2-201ENST00000516978 73 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.85□□□□□ -2.11
VAT1Q99536 RANP3-201ENST00000530970 276 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 LRRC6P1-201ENST00000532188 885 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 CBX3P7-201ENST00000532876 502 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 AL133241.1-201ENST00000556832 487 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.85□□□□□ -2.11
VAT1Q99536 MIR4765-201ENST00000585007 77 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.85□□□□□ -2.11
VAT1Q99536 AC068790.3-201ENST00000602988 553 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 AC021171.1-201ENST00000603137 706 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 AC091152.3-201ENST00000604227 325 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 AC104763.3-201ENST00000613765 618 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.85□□□□□ -2.11
VAT1Q99536 MTND5P30-201ENST00000452896 1731 ntBASIC1.85□□□□□ -2.11
VAT1Q99536 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
VAT1Q99536 RNU1-148P-201ENST00000384472 162 ntBASIC1.84□□□□□ -2.11
VAT1Q99536 RNU6-298P-201ENST00000390888 96 ntBASIC1.84□□□□□ -2.11
VAT1Q99536 RNU2-68P-201ENST00000410878 191 ntBASIC1.84□□□□□ -2.11
VAT1Q99536 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.84□□□□□ -2.11
VAT1Q99536 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.84□□□□□ -2.11
VAT1Q99536 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.84□□□□□ -2.11
VAT1Q99536 AC093106.2-201ENST00000428212 385 ntBASIC1.84□□□□□ -2.11
VAT1Q99536 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
VAT1Q99536 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.84□□□□□ -2.11
VAT1Q99536 NANOGP2-201ENST00000435391 727 ntBASIC1.84□□□□□ -2.11
VAT1Q99536 RPL32P28-201ENST00000443577 397 ntBASIC1.84□□□□□ -2.11
VAT1Q99536 AC124916.1-201ENST00000444020 547 ntBASIC1.84□□□□□ -2.11
VAT1Q99536 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.84□□□□□ -2.11
VAT1Q99536 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
VAT1Q99536 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.84□□□□□ -2.11
VAT1Q99536 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.11
VAT1Q99536 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.84□□□□□ -2.11
VAT1Q99536 AC096571.1-202ENST00000506634 735 ntBASIC1.84□□□□□ -2.11
VAT1Q99536 RPL23AP94-201ENST00000512518 302 ntBASIC1.84□□□□□ -2.11
VAT1Q99536 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.84□□□□□ -2.11
VAT1Q99536 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.84□□□□□ -2.11
VAT1Q99536 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.84□□□□□ -2.11
VAT1Q99536 AC006199.1-201ENST00000548728 219 ntBASIC1.84□□□□□ -2.11
VAT1Q99536 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.84□□□□□ -2.11
VAT1Q99536 YWHAZP1-201ENST00000556286 722 ntBASIC1.84□□□□□ -2.11
VAT1Q99536 AC110588.1-201ENST00000559699 137 ntBASIC1.84□□□□□ -2.11
VAT1Q99536 MIR4419B-201ENST00000577260 68 ntBASIC1.84□□□□□ -2.11
VAT1Q99536 AC105245.1-201ENST00000581934 244 ntBASIC1.84□□□□□ -2.11
VAT1Q99536 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.84□□□□□ -2.11
VAT1Q99536 BNIP3P26-201ENST00000600827 554 ntBASIC1.84□□□□□ -2.11
VAT1Q99536 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.84□□□□□ -2.11
VAT1Q99536 DPPA3P3-201ENST00000603842 430 ntBASIC1.84□□□□□ -2.11
VAT1Q99536 AL161798.1-201ENST00000604630 131 ntBASIC1.84□□□□□ -2.11
VAT1Q99536 RPL21P136-201ENST00000605378 396 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms