Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS35Q96QK1 AC092192.1-201ENST00000633154 1018 ntBASIC2.47□□□□□ -2.01
VPS35Q96QK1 MIR3199-2-201ENST00000636243 86 ntBASIC2.47□□□□□ -2.01
VPS35Q96QK1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS35Q96QK1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
VPS35Q96QK1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
VPS35Q96QK1 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
VPS35Q96QK1 AC135776.4-201ENST00000624300 1904 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VPS35Q96QK1 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
VPS35Q96QK1 RNU6-14P-201ENST00000384630 106 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 SNORA80E-201ENST00000384744 137 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 AL359511.1-201ENST00000402970 211 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 RNU2-62P-201ENST00000410868 191 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.46□□□□□ -2.02
VPS35Q96QK1 XKRYP1-201ENST00000423438 492 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 RAC1P6-201ENST00000423911 575 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
VPS35Q96QK1 XKRYP2-201ENST00000432915 492 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 AL008629.1-201ENST00000438615 184 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 OSTCP8-201ENST00000445117 448 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
VPS35Q96QK1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.46□□□□□ -2.02
VPS35Q96QK1 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.46□□□□□ -2.02
VPS35Q96QK1 AC128713.1-201ENST00000471495 306 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 LINC00888-204ENST00000487386 421 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.46□□□□□ -2.02
VPS35Q96QK1 SNORA3.4-201ENST00000515969 96 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.46□□□□□ -2.02
VPS35Q96QK1 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.46□□□□□ -2.02
VPS35Q96QK1 CKS1BP7-201ENST00000522230 235 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.46□□□□□ -2.02
VPS35Q96QK1 OR5BN1P-201ENST00000532955 829 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 ARL2BPP2-201ENST00000550907 489 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.46□□□□□ -2.02
VPS35Q96QK1 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.46□□□□□ -2.02
VPS35Q96QK1 AC008751.2-201ENST00000597885 980 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 AP001981.2-201ENST00000603241 418 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 AL358072.1-201ENST00000604156 575 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 AP000860.1-201ENST00000605250 559 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 AC026790.2-201ENST00000606282 430 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.46□□□□□ -2.02
VPS35Q96QK1 AL137847.3-201ENST00000611521 109 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.46□□□□□ -2.02
VPS35Q96QK1 AL356266.1-201ENST00000623311 483 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VPS35Q96QK1 AC016717.2-201ENST00000609089 5141 ntBASIC2.46□□□□□ -2.02
VPS35Q96QK1 AC104454.1-201ENST00000421341 1401 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 AC004520.1-201ENST00000608362 1413 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
VPS35Q96QK1 RNU6-658P-201ENST00000384606 106 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
VPS35Q96QK1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
VPS35Q96QK1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VPS35Q96QK1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.45□□□□□ -2.02
VPS35Q96QK1 RPL22P17-201ENST00000438729 315 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 RPS12P2-201ENST00000439728 269 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 AC118469.1-201ENST00000442943 488 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 RPL23AP45-201ENST00000476406 468 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 AC139453.3-201ENST00000493276 369 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 AC114781.4-201ENST00000513707 639 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.45□□□□□ -2.02
VPS35Q96QK1 AC022447.1-201ENST00000515358 464 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
VPS35Q96QK1 IGLV3-17-201ENST00000519099 244 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 AC022616.6-201ENST00000520479 119 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.45□□□□□ -2.02
VPS35Q96QK1 MTND4LP18-201ENST00000526864 291 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.45□□□□□ -2.02
VPS35Q96QK1 MTND1P24-201ENST00000552175 861 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 ZNF519P3-201ENST00000557158 1032 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.45□□□□□ -2.02
VPS35Q96QK1 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS35Q96QK1 AL670379.6-201ENST00000603753 252 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 AL670379.11-201ENST00000604059 253 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 AC007621.1-201ENST00000604544 437 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 AC008162.1-201ENST00000604718 254 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 AC007363.1-201ENST00000604736 620 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 AL670379.1-201ENST00000604752 252 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 AL670379.5-201ENST00000605253 252 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 AL670379.12-201ENST00000605291 253 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 AL670379.8-201ENST00000605353 252 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 AL670379.7-201ENST00000605823 252 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 AL589994.2-201ENST00000621124 579 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS35Q96QK1 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS35Q96QK1 CTSLP2-204ENST00000629029 392 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 AC243829.7-201ENST00000633081 225 ntBASIC2.45□□□□□ -2.02
VPS35Q96QK1 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.45□□□□□ -2.02
VPS35Q96QK1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
VPS35Q96QK1 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS35Q96QK1 ADAM3A-203ENST00000461344 2157 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VPS35Q96QK1 AC092104.1-201ENST00000497346 1441 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VPS35Q96QK1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.44□□□□□ -2.02
VPS35Q96QK1 RNY4P16-201ENST00000364768 94 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 RNU6-817P-201ENST00000391083 104 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 RNU2-36P-201ENST00000410361 191 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms